| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphy_3348 |
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| Symbol | |
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| ID | 5741630 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium phytofermentans ISDg |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010001 |
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| Strand | - |
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| Start bp | 4077540 |
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| End bp | 4079213 |
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| Gene Length | 1674 bp |
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| Protein Length | 557 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 641294451 |
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| Product | dihydroxy-acid dehydratase |
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| Protein accession | YP_001560440 |
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| Protein GI | 160881472 |
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| COG category | [E] Amino acid transport and metabolism
[G] Carbohydrate transport and metabolism |
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| COG ID | [COG0129] Dihydroxyacid dehydratase/phosphogluconate dehydratase |
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| TIGRFAM ID | [TIGR00110] dihydroxy-acid dehydratase |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0168284 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAGTG ATGCAGTAAC CAAAGGGATA CAACAAGCAC CTCATCGATC TTTATTTAAT
GCGTTGGGAT TAACCAAGGA AGAACTAGAT AAACCACTCA TAGGTATTGT AAGTTCTTAT
AATGAAATTG TACCAGGACA TATGAACTTA GATAAGATAG TGGAAGCCGT GAAATTAGGA
GTTGCGATGG CAGGAGGAAC ACCAATCGTA TTTCCAGCGA TTGCAGTATG TGATGGAATT
GCGATGGGAC ATATCGGTAT GAAATATTCC CTAGTAACGA GGGATTTGAT TGCTGATTCT
ACTGAAGCAA TGGCAATGGC ACATAGTTTT GATGCTTTAG TAATGGTTCC AAACTGTGAT
AAGAATGTTC CAGGTTTACT TATGGCAGCA GCTAGAGTAA ATATTCCTAC CATATTTGTA
AGTGGAGGAC CAATGCTTGC AGGTCGTGTT CACGGAGAAA AGAGAAGCCT TAGCAGTATG
TTTGAAGCAG TTGGCGCACA TGCAGCTGGT AAGATGACGG AAGAGGAAGT TGAGGAATTT
GAAAATAAAG TTTGCCCAAC CTGCGGATCT TGCTCCGGAA TGTATACGGC AAACAGTATG
AACTGTTTAA CAGAGGCGCT AGGAATGGGA CTGAAAGGAA ATGGAACAAT TCCAGCAGTA
TACTCTGAAC GTATTCGACT TGCAAAACAT GCCGGTATGA AGATTATGGA GCTTCTACAG
AATAATATAC GTCCAAGAGA TATTATGTCA GAGAAGGCTT TTCTTAATGC GTTGGCAGTC
GATATGGCAC TTGGCTGTTC TACAAACAGT ATGTTACACC TACCAGCCAT TGCTCATGAG
GCAGGAGTTG ATTTAAATGT AGATATCGCA AATGAAATCA GTGCAAAGAC TCCAAACCTA
TGTCACCTTG CTCCGGCTGG TCATACTTAC ATGGAAGATT TGAATGAAGC CGGCGGTGTC
TATGCTGTTA TGAATGAACT TGATAAGAAG GGATTATTGT ATACAGACCT AATTACTTGT
ACAGGTAAGA CTATTAAAGA GAATATTGAA GGCTGTGTAA ATAGAGATCC AGATACAATT
CGTCCAATTG AAAATCCATA TAGTCAAACT GGTGGAATCG CAGTGTTAAA GGGTAATCTA
GCGCCAGACT CCGGTGTAGT AAAACGCTCT GCTGTAGCAC CTGAGATGAT GGTGCATGTT
GGACCTGCAA GAGTATTTGA TTGTGAAGAG GATGCAATTG ACGCAATTAA GAGTGGGAAA
ATTGTTGCGG GAGATGTCGT AGTAATTCGA TATGAAGGAC CAAAGGGTGG ACCTGGTATG
CGAGAAATGC TAAACCCTAC CTCTGCTATT GCAGGTATGG GACTTGGTTC TTCTGTTGCA
TTAATTACAG ATGGCCGTTT CTCTGGTGCA TCCAGAGGTG CATCGATAGG TCACGTATCA
CCGGAAGCAG CGGTTGGTGG TAATATCGCT CTCATAGAGG AGGGGGATAT CATCAAAATT
GATATACCGA ATAATTCTCT TAACTTCGTA GTATCCGACG AGGAGTTAGA GAGAAGAAGA
GTCAATTGGA GCCCAAGAGA GCCCAAAATT ACGACGGGTT ACCTTGCACG TTATACTGCT
ATGGTTACCT CTGGAAATCG TGGTGCAATT TTAGAAGTTC CACGTGTTAA GTAA
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| Protein sequence | MKSDAVTKGI QQAPHRSLFN ALGLTKEELD KPLIGIVSSY NEIVPGHMNL DKIVEAVKLG
VAMAGGTPIV FPAIAVCDGI AMGHIGMKYS LVTRDLIADS TEAMAMAHSF DALVMVPNCD
KNVPGLLMAA ARVNIPTIFV SGGPMLAGRV HGEKRSLSSM FEAVGAHAAG KMTEEEVEEF
ENKVCPTCGS CSGMYTANSM NCLTEALGMG LKGNGTIPAV YSERIRLAKH AGMKIMELLQ
NNIRPRDIMS EKAFLNALAV DMALGCSTNS MLHLPAIAHE AGVDLNVDIA NEISAKTPNL
CHLAPAGHTY MEDLNEAGGV YAVMNELDKK GLLYTDLITC TGKTIKENIE GCVNRDPDTI
RPIENPYSQT GGIAVLKGNL APDSGVVKRS AVAPEMMVHV GPARVFDCEE DAIDAIKSGK
IVAGDVVVIR YEGPKGGPGM REMLNPTSAI AGMGLGSSVA LITDGRFSGA SRGASIGHVS
PEAAVGGNIA LIEEGDIIKI DIPNNSLNFV VSDEELERRR VNWSPREPKI TTGYLARYTA
MVTSGNRGAI LEVPRVK
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