| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphy_3343 |
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| Symbol | |
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| ID | 5741625 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium phytofermentans ISDg |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010001 |
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| Strand | - |
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| Start bp | 4070205 |
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| End bp | 4071074 |
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| Gene Length | 870 bp |
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| Protein Length | 289 aa |
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| Translation table | 11 |
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| GC content | 37% |
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| IMG OID | 641294446 |
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| Product | degV family protein |
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| Protein accession | YP_001560435 |
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| Protein GI | 160881467 |
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| COG category | [S] Function unknown |
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| COG ID | [COG1307] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR00762] EDD domain protein, DegV family |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.00000215363 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAGAGT TTGTCATTAC AACAGATTCC AATTCGGATT TATTGCCATC CTACATTAAA
GAGAAAAATA TTGGTATTAT CTCTCATTAT TATGATTTAG AAGGCATAAC TTACGGGGAG
GACCATTTAT TATCTGCGAA AGAATTCTAT GATAAAATGC GTGCAGGTGT TATGCCAACA
ACTATGGCAA GTAACCCTGC CGTAATTCGC GAAACCTTTC AGAAATATGT TAGTGAGGGG
TATGATGTTC TTCATATTAG TTTTTCATCT GCACTTAGTG GTGGCTGTAA CAATGTTATG
GTAGGTGCAA AAGAAGTATG TGAGGAAAAT GAAGGCGCTA AGATTATTGT TATTGATACC
TTGAATGTAT CCTTAGGTCA AGGTATGGTT ATAATGAAAG CTGCCGCGAT GAGAGAGCAG
GGCAAGAGTA TCGATGAAGT AGCTGCCTGG ATTGAAGAAC ATAAATTAGA ATTTTGTGTT
CAATTTACCG TAGATGATTT ACATCATCTT CATAGAGGTG GTCGAGTTTC TAAGGCAACA
GCTATTGTAG GATCTATGAT AAATATTAAG CCTATTTTGG TCGTTAACAA CGAAGGTCAG
CTTGTATCGA ATGGAACTAC TCGTGGAAGA AAGAAATCAC TAGCTACATT AGTGGATAAT
ATGCTATCTA CCATGGGAAA ATATAAGAAC GAGAATAATG TTATCTGTGT TGTACATGGA
GATGTCGAAG AGGATGCTAA TTTCTTAGTA AATCTCATAA AGGAAAAGTT ACATACCGAC
GACATTATTG TGAATACAGT AAGCCCAAGT ATTGGAGCTC ATTCCGGTCC TGGTGCAATC
GGTATTTGTT ATATGGGAGA GCATCGATAA
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| Protein sequence | MKEFVITTDS NSDLLPSYIK EKNIGIISHY YDLEGITYGE DHLLSAKEFY DKMRAGVMPT
TMASNPAVIR ETFQKYVSEG YDVLHISFSS ALSGGCNNVM VGAKEVCEEN EGAKIIVIDT
LNVSLGQGMV IMKAAAMREQ GKSIDEVAAW IEEHKLEFCV QFTVDDLHHL HRGGRVSKAT
AIVGSMINIK PILVVNNEGQ LVSNGTTRGR KKSLATLVDN MLSTMGKYKN ENNVICVVHG
DVEEDANFLV NLIKEKLHTD DIIVNTVSPS IGAHSGPGAI GICYMGEHR
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