Gene Cphy_3176 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCphy_3176 
Symbol 
ID5743264 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium phytofermentans ISDg 
KingdomBacteria 
Replicon accessionNC_010001 
Strand- 
Start bp3879814 
End bp3880500 
Gene Length687 bp 
Protein Length228 aa 
Translation table11 
GC content36% 
IMG OID641294277 
Producttransposase IS3/IS911 family protein 
Protein accessionYP_001560270 
Protein GI160881302 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones9 
Plasmid unclonability p-value0.00365869 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCTAAAT CACCTTCTTC ACCAGCTCAA AAATTAAAGG CTGTTGAAGA TTATTTAACT 
GGATCAAAGA ACCTACAAGA GATATGTACA GAACTGAAAA TTGCTAGTAA AGAAACTGTA 
CGTAAATGGG TTCTATTATT TCAAAATCAA GGAGCAGAAG CGTTTATTTC AACTAGCGGG 
AATAAAAGTT ATACAAAAGA ATTTAAAACC ATGGTTGTCG AGGAATATAT TGCTGGAAAT 
GGCTCGCTCC CAGAACTCAT GGCTAAATAT AATATTTGTG CGGTTTCTTC TTTAGCAAGA 
TGGATTTCAG TGTATAATAG CGATATGGAA CTAAAGGATT ATAATCCGAA ACAGGAGGTC 
TATATGGCTG AAGCAAGAAG AAAAGTAACA ATTGAAGAAC GTAAGGAAAT CGTTGCATAC 
TGTATCGAAC ATGGATGTGA TTATAAGAAT ACTGCTGAAC AATATGATGT TTCTTATAGT 
CAAGTCTATA GCTGGGTTCG CAAATACAAT GCTAGTGGTG AAGAGGGCTT GGCAGATAAA 
CGTGGTCATC ACAAATCTGA TGAAGAAGTT GATGAGCTAG AGAAACTTCG GAGGGAAAAC 
AAACGTCTGA AACGCCAGCT TGAAGAAAGA GATATGATTG TAGAACTGTT AAAAAAAGTG 
AAGGAATTCG AAAGGAGGCG ATTCTAG
 
Protein sequence
MSKSPSSPAQ KLKAVEDYLT GSKNLQEICT ELKIASKETV RKWVLLFQNQ GAEAFISTSG 
NKSYTKEFKT MVVEEYIAGN GSLPELMAKY NICAVSSLAR WISVYNSDME LKDYNPKQEV 
YMAEARRKVT IEERKEIVAY CIEHGCDYKN TAEQYDVSYS QVYSWVRKYN ASGEEGLADK 
RGHHKSDEEV DELEKLRREN KRLKRQLEER DMIVELLKKV KEFERRRF