| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphy_3162 |
|---|
| Symbol | |
|---|
| ID | 5743249 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium phytofermentans ISDg |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010001 |
|---|
| Strand | - |
|---|
| Start bp | 3864223 |
|---|
| End bp | 3864546 |
|---|
| Gene Length | 324 bp |
|---|
| Protein Length | 107 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 31% |
|---|
| IMG OID | 641294262 |
|---|
| Product | regulatory protein, LuxR |
|---|
| Protein accession | YP_001560256 |
|---|
| Protein GI | 160881288 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3860] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 38 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGGACTATA AACAGCAAGA GGAAAAGGTG CTCGTATTAT TAAAAAATTT AATGAATAAA
GAAAACCATC TAATTGAATA TCCAGCAAAA AGAAAACTTA AGAATGCAGC TCTGTTTTGG
ATTTCAAAAG AGTTTGAGAG TGGAAGAGAA TACAAAGAAA AAGAAATGAA TGAGATAATT
AACTCTGTTT GTTGTTTTAA AGATGCAGCA TTAATTAGAA GAGAATTGTA TAACTTTCGC
TTTATAAATC GAACAGAGAA TGGTTCTGCG TATTGGCTTG AGGAGGTACA GCCTTCTTTA
CAGGAATTAG GATTAATGGA ATAA
|
|---|
| Protein sequence | MDYKQQEEKV LVLLKNLMNK ENHLIEYPAK RKLKNAALFW ISKEFESGRE YKEKEMNEII
NSVCCFKDAA LIRRELYNFR FINRTENGSA YWLEEVQPSL QELGLME
|
|---|
| |