Gene Cphy_3162 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCphy_3162 
Symbol 
ID5743249 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium phytofermentans ISDg 
KingdomBacteria 
Replicon accessionNC_010001 
Strand
Start bp3864223 
End bp3864546 
Gene Length324 bp 
Protein Length107 aa 
Translation table11 
GC content31% 
IMG OID641294262 
Productregulatory protein, LuxR 
Protein accessionYP_001560256 
Protein GI160881288 
COG category[S] Function unknown 
COG ID[COG3860] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGACTATA AACAGCAAGA GGAAAAGGTG CTCGTATTAT TAAAAAATTT AATGAATAAA 
GAAAACCATC TAATTGAATA TCCAGCAAAA AGAAAACTTA AGAATGCAGC TCTGTTTTGG
ATTTCAAAAG AGTTTGAGAG TGGAAGAGAA TACAAAGAAA AAGAAATGAA TGAGATAATT
AACTCTGTTT GTTGTTTTAA AGATGCAGCA TTAATTAGAA GAGAATTGTA TAACTTTCGC
TTTATAAATC GAACAGAGAA TGGTTCTGCG TATTGGCTTG AGGAGGTACA GCCTTCTTTA
CAGGAATTAG GATTAATGGA ATAA
 
Protein sequence
MDYKQQEEKV LVLLKNLMNK ENHLIEYPAK RKLKNAALFW ISKEFESGRE YKEKEMNEII 
NSVCCFKDAA LIRRELYNFR FINRTENGSA YWLEEVQPSL QELGLME