Gene Cphy_3110 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCphy_3110 
Symbol 
ID5743196 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium phytofermentans ISDg 
KingdomBacteria 
Replicon accessionNC_010001 
Strand
Start bp3803988 
End bp3804848 
Gene Length861 bp 
Protein Length286 aa 
Translation table11 
GC content36% 
IMG OID641294210 
Product5,10-methylenetetrahydrofolate reductase 
Protein accessionYP_001560205 
Protein GI160881237 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0685] 5,10-methylenetetrahydrofolate reductase 
TIGRFAM ID[TIGR00676] 5,10-methylenetetrahydrofolate reductase, prokaryotic form 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000000303787 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAGATAT CAAAAAAGTT CGGACAAGGG AAAACCGTAT TTTCCCTTGA GGTATTTCCA 
CCAAAGAAGG ATAGTCCAGT GGAAAGTATA TATCGTGTTT TAGGCGAGTT AACAAAATTA
AATCCTGATT TCATTAGCGT AACGTATGGT GCCGGAGGTA ATGCGGCTGA TCATACTACC
TGTGATATTG CATCTTATAT ACAATCAAAT TATGGAATCG ATGCACTTAC TCATCTTACT
TGCGTAAATT CTACGAAAGA AGATATGGAT ACCACCCTTG AGTATCTAAA AAGTCAAGGA
ATTATGAATA TCTTGGCTTT AAGGGGAGAC AGGAATCCAG AGATAGAGCC CAAAAAAGAC
TTTACTTATG CCAGCAACTT AGTGGAATAC ATTAAGACTA AGGGAGATTT TCATCTATCT
GGGGCTTGTT ATCCTGAAAT TCATATAGAA GCATCTAGTA TGGAGGAGAA TCTAGAATAT
TTAAAGTATA AGGTGGATTG TGGTGCAGAT CATCTGATCT CCCAATTGTT TTTTGATAAT
GATTATTTTT TTAATTTCTT AGAAAAAGCA AGAAATAAAG GAATTACAGT TCCAATTGAG
GCTGGGATTA TGCCAGTAGT AAATAAGAAA CAAATTGAGC GTATGGTTAC CATGTGTGGA
GCTAGTATTC CTTCTAAACT CGCTAAGATT TTACAACGTT ATGAACACCA GGAAGAAGCA
TTAAGAGATG CTGGAATTGC GTATGCAGTA GAACAAATTA TGCATTTAGT AGCAAGTGGA
GTGGATGGAA TCCATTTATA TACAATGAAT AACGCATACA TAGCAACGAA GATTCACGAA
GCAATCTTTC GATTATTATA A
 
Protein sequence
MQISKKFGQG KTVFSLEVFP PKKDSPVESI YRVLGELTKL NPDFISVTYG AGGNAADHTT 
CDIASYIQSN YGIDALTHLT CVNSTKEDMD TTLEYLKSQG IMNILALRGD RNPEIEPKKD
FTYASNLVEY IKTKGDFHLS GACYPEIHIE ASSMEENLEY LKYKVDCGAD HLISQLFFDN
DYFFNFLEKA RNKGITVPIE AGIMPVVNKK QIERMVTMCG ASIPSKLAKI LQRYEHQEEA
LRDAGIAYAV EQIMHLVASG VDGIHLYTMN NAYIATKIHE AIFRLL