Gene Cphy_3104 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCphy_3104 
Symbol 
ID5743190 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium phytofermentans ISDg 
KingdomBacteria 
Replicon accessionNC_010001 
Strand
Start bp3794965 
End bp3796023 
Gene Length1059 bp 
Protein Length352 aa 
Translation table11 
GC content36% 
IMG OID641294204 
ProductABC transporter related 
Protein accessionYP_001560199 
Protein GI160881231 
COG category[R] General function prediction only 
COG ID[COG1123] ATPase components of various ABC-type transport systems, contain duplicated ATPase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGGAATTAT TAAGTTTAAA TTCAGTATCA ATTGGATATG GGGGAAATCA TGGGAAAAGC 
GGAGAAAATC TGGCTGTAAA GAAAGCAAGC TTTTCGATTC AAAAAGGAGA AATCTTTGGT
CTTATGGGAG AGTCTGGTTC AGGAAAGACT ACGATAGGAA GAGCAATCAT GCGAATGATT
GATACAGTAG AAGGAGACAT AACTTATAAA GGTATGAAAA TTAATCATAA ACTATCTACA
GATACAAGAA GAACGCTATG TCATGAAATG CAAATGATTT TTCAAGATCC AATGGCATCC
CTAAATGAGC GAGCGAAAGT TTCAGATATT ATTGGAGAAG GGCTTTTTGC TACGAATCAA
GCATTATCGA ATTCGGAGAG GGAAAGCCTG ATTGATAAAA TAATGCTTGA GGTTGGCTTA
CGGCCTGAAT ATAAAAATCG ATATCCAACA GAATTTTCTG GAGGACAACG GCAGCGAATT
GGTATTGCGA GGGCACTTAT TATGGAACCG CAATTTATTG TGGCAGATGA ACCTATTTCA
GCCTTAGATG TTTCAGTGCG GGCACAGATA TTAAATCTTA TGAAGAGACT TCAAGAAACT
CGCGGGCTAA CTTACCTTTT TATTTCACAT GATATGTCAG TAATGCGATA TTTTACAGAT
CGAATCGCAG TTCTTTATCA TGGAAGGATT GTTGAGATAG CGCCGACGAA TCGGCTTTTT
ACAACTCCTT ATCATACTTA TACCAAGATG TTGATTTCCT CTATTCCAAA ACCTGATCCG
TTAAGAAGAG TAATTATGGA GAGAAGAGGA GAACTAAATG ATAACCAAAG TGAGATGAAA
CCAAGTTCTC GGAATATAAA TTTTGATGTA ATTTCAAATA AATACAAGGG AAGAGAAGTT
GATATTATAT CAGGTAAACA CAGCGAGAGT AAATTTGTTA ATGTTTTAAG TAAAGACGAG
TGGAAAGAAT TTAATATTAT TTCTAGTAAA TATAAGGAAA GGGACGCTCA AAGAATGGTT
GAACGAGCAC CAGGTCACTA TGTGCTAGAA GCATATTGA
 
Protein sequence
MELLSLNSVS IGYGGNHGKS GENLAVKKAS FSIQKGEIFG LMGESGSGKT TIGRAIMRMI 
DTVEGDITYK GMKINHKLST DTRRTLCHEM QMIFQDPMAS LNERAKVSDI IGEGLFATNQ
ALSNSERESL IDKIMLEVGL RPEYKNRYPT EFSGGQRQRI GIARALIMEP QFIVADEPIS
ALDVSVRAQI LNLMKRLQET RGLTYLFISH DMSVMRYFTD RIAVLYHGRI VEIAPTNRLF
TTPYHTYTKM LISSIPKPDP LRRVIMERRG ELNDNQSEMK PSSRNINFDV ISNKYKGREV
DIISGKHSES KFVNVLSKDE WKEFNIISSK YKERDAQRMV ERAPGHYVLE AY