Gene Cphy_2988 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCphy_2988 
Symbol 
ID5744050 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium phytofermentans ISDg 
KingdomBacteria 
Replicon accessionNC_010001 
Strand
Start bp3649600 
End bp3650316 
Gene Length717 bp 
Protein Length238 aa 
Translation table11 
GC content39% 
IMG OID641294089 
Producthypothetical protein 
Protein accessionYP_001560084 
Protein GI160881116 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000131055 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAAGGAA TGATTTATAA GGCAATTAGT AGTGTCATGG AGGATATTGG AGCCATTAGT 
AAGAACTCCA GGAACCAACA ACAAGGATTT ATGTTCAGGG GAATTGATGC AGTAATGAAT
GCAATTAATC CGGCACTAAT TAAGCATAAA TTATTTGTTG TACCGGAGAT TTTGGAACAG
ACAAGAGAAG AACGAACAAC TACCAAGGGA GGGAACCTTA TTTACTCGAT TTGTAAGGTG
AAGTATACCT TCTATGCGGA GGATGGTTCA AACATTGAAG CTATTGTGAT TGGTGAAGGC
ATGGATAGTG GTGACAAGGC AACTAATAAA GCGATGTCTA TTGCATTTAA ATACGCTTGT
TTCCAAGTCT TCTGTATTCC AACAGAGGAA ATGAAGGATC CAGACGAAGA GTTTCATGAT
GTTAACCCAA GAGGGAAAAC GAATGCAAAA CCGGAGCAAA AGAATAACAA GCCAAAACCA
GAGAATAAGC CTAAAGATTC AATAACAGAA AAGAAACAAG AGGAACAAGA GCCATCTACT
GAATTAGATG CTATCAAGAT GGCTGAACTC AACGCAGAGC TAGCACGTAC CGGTGCTAGC
GTTAAGAGCA TGTTAATGTT CTACAAGATT GATTCAGTAG AAAAGCTTAC TCCGGAAAAT
TTAGAAGATG CAATTAAGAG ATTAAAACCA TTGAGAGATA AGAAGGTGGG TGCCTAA
 
Protein sequence
MEGMIYKAIS SVMEDIGAIS KNSRNQQQGF MFRGIDAVMN AINPALIKHK LFVVPEILEQ 
TREERTTTKG GNLIYSICKV KYTFYAEDGS NIEAIVIGEG MDSGDKATNK AMSIAFKYAC
FQVFCIPTEE MKDPDEEFHD VNPRGKTNAK PEQKNNKPKP ENKPKDSITE KKQEEQEPST
ELDAIKMAEL NAELARTGAS VKSMLMFYKI DSVEKLTPEN LEDAIKRLKP LRDKKVGA