Gene Cphy_2888 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCphy_2888 
Symbol 
ID5745161 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium phytofermentans ISDg 
KingdomBacteria 
Replicon accessionNC_010001 
Strand- 
Start bp3542889 
End bp3543983 
Gene Length1095 bp 
Protein Length364 aa 
Translation table11 
GC content34% 
IMG OID641293988 
ProductUDP-galactopyranose mutase 
Protein accessionYP_001559985 
Protein GI160881017 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0562] UDP-galactopyranose mutase 
TIGRFAM ID[TIGR00031] UDP-galactopyranose mutase 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.656694 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAGTTA AGAATGTAGT AGTTGGAGCA GGGCTGGCGG GGCTAACCAT TGCACAGCGT 
ATCGCAAGCG AATGGCAGGA AGAGGTATTA GTGATTGAGA AGAGAGATCA TATTGGAGGA 
AATGTTTTTG ATTCCTACAA TGAAGATGGC ATCTTGATTC ATAATTATGG ACCTCATATC 
TTTCACACAA ATGATAAAGG TGTCTACGAA TATTTAAGTA AGTTTACGGA GTGGAATGAC 
TTTTGGCATA GAGTACTTAC TTATGTGGAC GGTAATTTGA TTCCAATGCC AATTACAGTG 
GAGACGATTA ACAAATTATA TAACCTGAAT CTTTCCTGTG AAGAGGTAGA AGAGTTCATA 
AAAAAACAAG CAGTTGCAAT TGATGAGATT AAAACTAGTA AAGATGTGGC ATTATCTAAG 
GTAGGTGTCG ACATTTACGA GAAGTTCTTT GAAAATTATA CAAAGAAGCA GTGGGGAATT 
GATCCAGGAG AAATTGATAC CTCAGTAATT AGTCGTATTC CAATTCGTTA TAATCGTGAT 
ACAAGATATT TTACCGATCG TTATCAAGGT ATGCCAAAAC ATGGATATAC TAAGATGTGT 
CAGAACATGA TTGCAGATAA GAAGATAAAG ATCTTATTGA ATACAGATTA TAAAGAGATT 
ATTGATGATT TAGACTATGA ATTACTAATC TATACGGGAC CAACGGATTA CTTTTATAAT 
TATAAACATG GCCAATTAGC ATACCGTAGC ATTGATTTTA AATTCGAAAC CATGGATTGC 
GAGAAGTATC AAGAGGCTCC GGTAGTAAAT TATCCGAATG ATTATGATTT TACAAGAATA 
ACAGAGTTTA AACAAATGAC ATGGCAAGAA AATAAGAAGA CAACTATATT AAAAGAGTTC 
CCATGTTCTG AGGGAGAACC TTATTATCCT TTCCCAACCA AAGAATGCAA AGAACAATTC 
GCATTATATC AAGAAGAGAT GAAGAGAGAA ACGAAAGTAC ATTTCTTAGG AAGACTTGCA 
GAATATCGAT ATTATAATAT GGATGCGGTC GTAAGAAGTG CATTGGATTT ATTTGATTCT 
TTAGAGAAAA AATAG
 
Protein sequence
MKVKNVVVGA GLAGLTIAQR IASEWQEEVL VIEKRDHIGG NVFDSYNEDG ILIHNYGPHI 
FHTNDKGVYE YLSKFTEWND FWHRVLTYVD GNLIPMPITV ETINKLYNLN LSCEEVEEFI 
KKQAVAIDEI KTSKDVALSK VGVDIYEKFF ENYTKKQWGI DPGEIDTSVI SRIPIRYNRD 
TRYFTDRYQG MPKHGYTKMC QNMIADKKIK ILLNTDYKEI IDDLDYELLI YTGPTDYFYN 
YKHGQLAYRS IDFKFETMDC EKYQEAPVVN YPNDYDFTRI TEFKQMTWQE NKKTTILKEF 
PCSEGEPYYP FPTKECKEQF ALYQEEMKRE TKVHFLGRLA EYRYYNMDAV VRSALDLFDS 
LEKK