Gene Cphy_2879 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCphy_2879 
Symbol 
ID5745152 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium phytofermentans ISDg 
KingdomBacteria 
Replicon accessionNC_010001 
Strand
Start bp3531402 
End bp3531650 
Gene Length249 bp 
Protein Length82 aa 
Translation table11 
GC content37% 
IMG OID641293979 
ProductDNA-directed RNA polymerase, omega subunit 
Protein accessionYP_001559976 
Protein GI160881008 
COG category[K] Transcription 
COG ID[COG1758] DNA-directed RNA polymerase, subunit K/omega 
TIGRFAM ID[TIGR00690] DNA-directed RNA polymerase, omega subunit 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000467592 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTACATC CATCTTATAA TGACTTAATG CAGGTAGTTA ATAGCGAGGT AGAACCAGGC 
GAACAGCCAG TAGTAAACAG CCGTTATTCT ATCGTATTAG CTACAGCAAA GCGTGCTAGA
CAAATTATTG ACGGTGCAGA ACCTTTAACA GAAAGTAGTT GCAATAAACC ACTTTCTATA
GCAGTGGAAG AGCTTTACAA ATCTAAAGTA AAGATCGTAA GCGAAGATGA CGAAAATGAA
AATGAATAA
 
Protein sequence
MLHPSYNDLM QVVNSEVEPG EQPVVNSRYS IVLATAKRAR QIIDGAEPLT ESSCNKPLSI 
AVEELYKSKV KIVSEDDENE NE