| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphy_2835 |
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| Symbol | |
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| ID | 5742151 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium phytofermentans ISDg |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010001 |
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| Strand | - |
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| Start bp | 3459444 |
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| End bp | 3461285 |
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| Gene Length | 1842 bp |
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| Protein Length | 613 aa |
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| Translation table | 11 |
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| GC content | 33% |
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| IMG OID | 641293927 |
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| Product | diguanylate cyclase/phosphodiesterase |
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| Protein accession | YP_001559934 |
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| Protein GI | 160880966 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2200] FOG: EAL domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCTATA ACAAGGAAGT GTTAGGAACG CAGTTTACCT TAGAATTATC GAGCTATGCC
TTGGACATTG TAAGCAGAGT AAATGATGTA TCGGAAGCCA TTTCCCTTCT TTTAAAAAAG
GTTGGGGAAA AATTTTCATT AAGTCATATT ACTGTGTTAG AAAAGCAACG AAATTTGCCA
TGCTTTATGG CAACATATGA ATGGTATACA TCTGAGATTG AGCCAATACG GAATCATGTC
ATTACCTTTT CTGAAGAACA GAAAAATATT TTTTTAGAAC GTATTGACCA ATCAGAGGAG
ATATTTACTT ATGAAGAACT CAAAGAAATG AAAGAAGCAA AGAAAATGAT ATCTACTATG
AAGCAAAACA AAGCGGATAA CATGATATTA TGTGCTCTGA AACAAAATAA TAAATTTATT
GGATTCATAA ATTTTGAAAC AAGGAATAAG ATAGAAAGTT TCTCTGAAGA GGAGCTTAGT
GCTTTTTTAC AGACGAAACG AATTCTTGAA AACTTTTTTC TAGTATGTAG AGCTAATCAA
GAGGCACAAA AACGCATTGA GCAAGTTACT TTATTCGATC CAGTAACAGG GCTAATGAAG
TACGATTCCT TTTTAGAGCA AGCGGAGTTA ATTTATAAAA ATGATTCCAA TAATCAATAC
ATAATGTTTT ATGCAGATAT TACTAACTTT AAGTACTTTA ATGAAACTTA CGGATATGCT
GCAGGAGATG AAGTATTACG TTTATTTAAA CAACATTTTC TGTCACTCAG CTCAAGTTAC
ATTATTGGTT GCCGCATCTT TTCAGATTAT TTTATTGGAA TGACTGTTCT GAAAGAGCCG
TTAGTCGAGC GAAAATTAAT TCAGGAAATA CAGATGATAA ACTATAGCTT TCAAAAAAAG
ATACAAAGTA TTTATCCGGA ATCCTCAATT CATATTGTTT CGGGAGTCGT TTTGATTGAT
AACAAGAATT TAGATATTCA AACCTATATT GATAATGCGA ATCAAGCCAG AAAAATAGCG
AAATACAATC GAACAATTTG TGTTATCTTT AATAAAGACA TGGAAGCAGA ACGAAAAAAA
TACTATCGGA TTACAAGTAT TGCAGAGGAA GCTTTAAAGA ATGATGAGTT TTATTTTGAA
TTACAACCGA AGATCGATTT GAAAACTAAA AAAACGGTTG GGGCGGAAGC GTTGGTTCGT
TGGTCACGTC AAGACGGAAC CGTAGTATAT CCAAATGAAT TTGTACCAAT CTTTGAGCAG
AATGGTTTCA TTACAAAGTT AGACTTTTAT GTCTACGATA AAGTATGTGA ATATTTGTTA
CATAGAATTA GTCATGGAAA AGAGGTTGTT CCCATCTCGG TGAATGTTTC AAGAGCGCAT
TTAAAGCAAG ATAATTTTGC GAAAAAAGTA ATTCGCTTAG TTGAGCAACA TCGAATAGCT
CCAGAATATC TTGAATTTGA ACTGACAGAG AATATCTTTT TAGAAAATTC AGAGCAAGCC
AAAGAAACGT TAATTGAATT GAAGAATTAT GGATTTAAGG TATCGATGGA TGATTTCGGC
TCAGGATATT CTTCTTTAAA TCTATTAATG AATCTGGAGT TTGATATTTT AAAGTTGGAC
AAGGATTTCC TGACTGATAA TATAATTTCA AAAAAAGAGG AAGTAGTAAT TAAAAGTATC
ATAAGAATGG CGAAGTTAAT GAATATGACT GTCCTTTGTG AAGGAGTTGA AACAAAAGAA
CAGGTCGATT TTCTAGAACG GATACAGTGT GATATGGTGC AAGGTTATTA TTTCGGAAGA
CCAATGAAAA CCGAAGCGTT TGAAGAGTGT ATCTGTTCGT AG
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| Protein sequence | MTYNKEVLGT QFTLELSSYA LDIVSRVNDV SEAISLLLKK VGEKFSLSHI TVLEKQRNLP
CFMATYEWYT SEIEPIRNHV ITFSEEQKNI FLERIDQSEE IFTYEELKEM KEAKKMISTM
KQNKADNMIL CALKQNNKFI GFINFETRNK IESFSEEELS AFLQTKRILE NFFLVCRANQ
EAQKRIEQVT LFDPVTGLMK YDSFLEQAEL IYKNDSNNQY IMFYADITNF KYFNETYGYA
AGDEVLRLFK QHFLSLSSSY IIGCRIFSDY FIGMTVLKEP LVERKLIQEI QMINYSFQKK
IQSIYPESSI HIVSGVVLID NKNLDIQTYI DNANQARKIA KYNRTICVIF NKDMEAERKK
YYRITSIAEE ALKNDEFYFE LQPKIDLKTK KTVGAEALVR WSRQDGTVVY PNEFVPIFEQ
NGFITKLDFY VYDKVCEYLL HRISHGKEVV PISVNVSRAH LKQDNFAKKV IRLVEQHRIA
PEYLEFELTE NIFLENSEQA KETLIELKNY GFKVSMDDFG SGYSSLNLLM NLEFDILKLD
KDFLTDNIIS KKEEVVIKSI IRMAKLMNMT VLCEGVETKE QVDFLERIQC DMVQGYYFGR
PMKTEAFEEC ICS
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