| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphy_2717 |
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| Symbol | |
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| ID | 5743010 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium phytofermentans ISDg |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010001 |
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| Strand | - |
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| Start bp | 3304492 |
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| End bp | 3306087 |
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| Gene Length | 1596 bp |
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| Protein Length | 531 aa |
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| Translation table | 11 |
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| GC content | 34% |
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| IMG OID | 641293809 |
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| Product | flagellar M-ring protein FliF |
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| Protein accession | YP_001559817 |
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| Protein GI | 160880849 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1766] Flagellar biosynthesis/type III secretory pathway lipoprotein |
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| TIGRFAM ID | [TIGR00206] flagellar basal-body M-ring protein/flagellar hook-basal body protein (fliF) |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAGGAAC GAATAAAACA GATACCTGTT CGCTTATTAG AAATATGGAA GAAATATAGT
AAGAAGCAAA AAATAATTAT TATTAGCGTA GTTAGTTCCG TTATCTGCGC TTTATTACTT
CTTATCTTTC TACTTGGCAG AACGGAATAT GTAGAGCTCA TAAAACTTGA GGATACCAAA
ACGGCGTCAC AAGCAATTGA TATTCTTAAG GAGAACGGCA TCGCTTATCA ATTGAAAGAC
GATGGTGTAA CAGTCTTAGT AGATAATTCG AAAAAGACAG AGGCAAAGTT ATTAATTGCG
GATAGTGAAA TTGCTTCGAA AGCAAAGTTA AGCTTAGAAC AATTACTAAA CAACGATATG
TCTACCACGA ACTATGACAA GCAAACAAAG CTTCATCTAT ATTACCAAGG TGATTTAGAA
GAGTTATTAA AGAAACAGGA AGGAATAGAT GATGCAAGAA TCAGTTATTT ACCTTCCGAT
AAAAGATCTA GTATTCTAGA ACAAGAAAAA GAAATTAGTT GTAGTATCTT TCTTACAATT
AATAGTAAAT TTAAAAAATC CTCTGCGGAG GCTATTGCAA TTACTGTTGC AAATAGTTTA
GGAAATGAAA CTACGAATAA GGTTAAAGTA ATCGATCAGT ATGGTAATTT ACTATACAAT
GGACCAGAAG ATGAAGAGAG TGAATACACA AATAAAAACT TAGAGTTTCG TCAGGCGGTA
TTAGGTGATT ACACTGAAAG AGTAGTGCGC TTTGGATTAA TGAACGGTTT TGATTATGTA
GAGCCAAGTT TCGCACTTGA TATAAATTTT GATAAGACTA CAGAAGAAAT TCGTGAGTAT
TTTGCAGGAG AAGGTTTAGA GCAAGGGTTA TATCAATCTT ATCAAAAAAT ATCGTCAGAA
AATCAAGGTT CTAACGGAGA TATTCCAGGA ACTGACTCAA ATACAGATAC CGATTACTAC
ATACAGACTG AGAAATCCGG TAAAAGCAGT TATGATGAAT TAAATATTTC TTATCTTCCT
AGTGAGAAAC TTACCAAGAC GCTAAAGGGC TGGGGTATTG TAAATGTCGA TACGTCAAAG
GTTGCAATCG CGTTAAAACG TGTGAAGGAT ATCAAAGAAG AAGATTTAAA ACTCTTGGGT
CTTTTAAATG GAACGACCTT TGAGGAATAT GTACTTAATA ACAGTGAACC AAAACAACTA
GATGTAAGCA AAGAATATTA TACTTTGTTT GCAAATGCAA CTGGACTTAA TGAGAATAAT
ATTTCTCTGA TTATGTGGGA AGTTCCGAAC TTTATCCCAA CACCAAAGTC TGATGTAAAC
TGGCAGTTAA TACTTGAGAT TATACTTGCA GCATTAATTT TAGGTCTATT GATCTTTGTG
GTATTCCGTG GTATGGCACC GGTAGAGGTA ACCGAAATTG AACCGGAATT ATCAGTAGAG
CAGCTATTAG CTACTACAAA AGAAAATCAA TCCTTAGATG ATATTGAATT TAGTGAAAAA
TCAGAGACCA GACGTATGAT TGAAAAATTC GTGGATGAAA ATCCAGAAGC AGTTGCTAAT
TTGCTTCGTA ATTGGTTAAC AGACGGTTGG GGTTGA
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| Protein sequence | MQERIKQIPV RLLEIWKKYS KKQKIIIISV VSSVICALLL LIFLLGRTEY VELIKLEDTK
TASQAIDILK ENGIAYQLKD DGVTVLVDNS KKTEAKLLIA DSEIASKAKL SLEQLLNNDM
STTNYDKQTK LHLYYQGDLE ELLKKQEGID DARISYLPSD KRSSILEQEK EISCSIFLTI
NSKFKKSSAE AIAITVANSL GNETTNKVKV IDQYGNLLYN GPEDEESEYT NKNLEFRQAV
LGDYTERVVR FGLMNGFDYV EPSFALDINF DKTTEEIREY FAGEGLEQGL YQSYQKISSE
NQGSNGDIPG TDSNTDTDYY IQTEKSGKSS YDELNISYLP SEKLTKTLKG WGIVNVDTSK
VAIALKRVKD IKEEDLKLLG LLNGTTFEEY VLNNSEPKQL DVSKEYYTLF ANATGLNENN
ISLIMWEVPN FIPTPKSDVN WQLILEIILA ALILGLLIFV VFRGMAPVEV TEIEPELSVE
QLLATTKENQ SLDDIEFSEK SETRRMIEKF VDENPEAVAN LLRNWLTDGW G
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