| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphy_2685 |
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| Symbol | |
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| ID | 5742852 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium phytofermentans ISDg |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010001 |
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| Strand | - |
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| Start bp | 3275119 |
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| End bp | 3275883 |
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| Gene Length | 765 bp |
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| Protein Length | 254 aa |
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| Translation table | 11 |
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| GC content | 36% |
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| IMG OID | 641293777 |
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| Product | RNA polymerase, sigma 28 subunit, FliA/WhiG |
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| Protein accession | YP_001559785 |
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| Protein GI | 160880817 |
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| COG category | [K] Transcription |
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| COG ID | [COG1191] DNA-directed RNA polymerase specialized sigma subunit |
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| TIGRFAM ID | [TIGR02479] RNA polymerase sigma factor, FliA/WhiG family
[TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTGCTG AAACAAAGCA AAAATTATGG GGTGAATACG GTAAGAAGAG AACTCCTGAC
ATCAGAGAAA AAATCATAAT TGAGTATGCG AATCTAGTAA AGATTGTAGC AGGAAGACTC
AGCATTTATT TAGGATATAA TGTGGAATAT GACGATTTGG TTGGTTATGG AACCTTCGGT
TTAATCGATG CTATAGATAA ATTTGACTGT GAAAAGGGAG CCAAATTCGA AACTTATGCA
TCTCTTCGTA TCCGTGGAGC AATCTTAGAT CAAATCCGTA AGATGGATTG GATTCCAAGA
ACATTAAGAC AGAAACAAAA ACGGTTAGAT GCGGCATATC AGAAATTGGA AACTATGTAT
GGCCGACAAG CAACGGATGA AGAAGTGGCA AAAGAGCTTG AAATTACTAC AGAAGAGCTA
GAAACTTGGC AGAATCAAAC GAAGATATCG AACCTAGTAT CCTTAGATGA ATATATGGAA
CAAGGGGAAG TTAAGGTAGA AAGTATTGCC AGTGAAGATT ATGCTCAACC AGAGAAGGTA
ATGGAAAAGC AAGAATTAAA AGCAATGTTA GTGAAGGCAT TAGAGTATCT GACAGAAAAA
GAAAAGAAAG TTATTGTCCT TTATTATTAT GAGGACTTAA CATTAAAAGA AATCAGTGCA
GTACTGGAAG TGTCTGAATC TAGAATATCA CAGCTGCATA CTAAGGCATT ACAAAAGATG
AGACAAAAGT TAGGTAATAA CTTAAATATA TTTATGGGGC AGTAA
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| Protein sequence | MSAETKQKLW GEYGKKRTPD IREKIIIEYA NLVKIVAGRL SIYLGYNVEY DDLVGYGTFG
LIDAIDKFDC EKGAKFETYA SLRIRGAILD QIRKMDWIPR TLRQKQKRLD AAYQKLETMY
GRQATDEEVA KELEITTEEL ETWQNQTKIS NLVSLDEYME QGEVKVESIA SEDYAQPEKV
MEKQELKAML VKALEYLTEK EKKVIVLYYY EDLTLKEISA VLEVSESRIS QLHTKALQKM
RQKLGNNLNI FMGQ
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