| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphy_2655 |
|---|
| Symbol | |
|---|
| ID | 5742822 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium phytofermentans ISDg |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010001 |
|---|
| Strand | - |
|---|
| Start bp | 3241527 |
|---|
| End bp | 3242447 |
|---|
| Gene Length | 921 bp |
|---|
| Protein Length | 306 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 34% |
|---|
| IMG OID | 641293747 |
|---|
| Product | binding-protein-dependent transport systems inner membrane component |
|---|
| Protein accession | YP_001559755 |
|---|
| Protein GI | 160880787 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0395] ABC-type sugar transport system, permease component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 41 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCAGTAT TAATTAGTGC AAAACAAAAT AAGAAATACG TTCCTTCTAA AATAAAAGAA
TCCAATAGTT ATAAGGTATT CAAAGTTTTT AATACAATTC TTATGATTAT TATATCGATA
GCAACCTTGT ATCCATTTCT TTATCTGGTT GCTCAATCAT TTTCTTCAGA AGCAGCGATT
ATAAAAGGGC AAGTTAGTAT ATTTCCAGTA GATTTTAATC TTGTTACATA TAAGTCAGTA
ATTGCAAAAG GGGATTTTCA GCGGTACTAC TTGAATACGG TTATCTACGC AGTATTAGGC
ACAATAGCAT CACTCTTTAC TTCCTCTATA CTAGCATACC CGTTGTCGAA ACCTCATCTT
AGATTAAACA AGTTTTTCGG TCCATTTATT ATCTTTACTA TGTATTTTGG TGGAGGTTTA
ATTCCGAACT ACGTATTGAT TAATAATCTT GGGCTTCGAA ATACAGTGGC AGCCTTCATT
CTTCCGGGAT TAGTTGGAAC TTATTATGTT CTTTTAATGA GATCTTTCTT TGCAAATGTT
CCGCAAGAAC TAGAAGAAGC AGGAGAAATA GACGGTTTAT CGAAATTTGG TGTGTTCTTT
AAAATTGTAT TACCACTTTC AAAGCCAATT ATGGCAACCA TGACTTTGTT CTATATGGCT
GGCTATTGGA GCAATTGGTT CACAGCATTT TTATATTTGG ATAGTAGAGA AAAATGGCCA
GTTGCTTATT ATTTGAGACA GATTATTATC GGAGCATCAA CATCTGCAAA TCCTGGTGCA
GCAAATGCAG AGACTATGCA AATTGCAGCC AATATCAAAT CTTGTTGTAT GGTGTTAATG
GCAGTACCTA TCATTTGTGT TTATCCTTTT ATACAAAAGT ACTTTGTACA AGGAATGATG
CTTGGTGGTG TTAAGGAATA A
|
|---|
| Protein sequence | MSVLISAKQN KKYVPSKIKE SNSYKVFKVF NTILMIIISI ATLYPFLYLV AQSFSSEAAI
IKGQVSIFPV DFNLVTYKSV IAKGDFQRYY LNTVIYAVLG TIASLFTSSI LAYPLSKPHL
RLNKFFGPFI IFTMYFGGGL IPNYVLINNL GLRNTVAAFI LPGLVGTYYV LLMRSFFANV
PQELEEAGEI DGLSKFGVFF KIVLPLSKPI MATMTLFYMA GYWSNWFTAF LYLDSREKWP
VAYYLRQIII GASTSANPGA ANAETMQIAA NIKSCCMVLM AVPIICVYPF IQKYFVQGMM
LGGVKE
|
|---|
| |