Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cphy_2621 |
Symbol | |
ID | 5742788 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium phytofermentans ISDg |
Kingdom | Bacteria |
Replicon accession | NC_010001 |
Strand | - |
Start bp | 3208713 |
End bp | 3210005 |
Gene Length | 1293 bp |
Protein Length | 430 aa |
Translation table | 11 |
GC content | 37% |
IMG OID | 641293713 |
Product | membrane-associated zinc metalloprotease |
Protein accession | YP_001559721 |
Protein GI | 160880753 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0750] Predicted membrane-associated Zn-dependent proteases 1 |
TIGRFAM ID | [TIGR00054] RIP metalloprotease RseP |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.0313354 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAATTA TTGTAGCATT GTTGATATTC GGAGTCATCA TAACTTTCCA TGAACTGGGA CATTTTTTGT TGGCGAAGAA GAACGGAATT GTAGTAACGG AGTTCTCTAT TGGAATGGGA CCTCGTCTGT TTAGCAAGGT TTATCATGAT ACTAGGTATT CGTTAAAGTT GTTACCAATT GGTGGCTCTT GTATGATGCT TGGAGAGGAT GAAGTAAATG ATAATGAAGG AGCGTTCAAC AATAAAAGTG TATGGGCGCG TATCTCTGCG ATATTTGCTG GACCATTATT TAACTTTATC TTAGCATTTT TTCTTGCATT ATTTGTAGTT GGAATGGTAG GTTATGATCC AGCTCGTGTT GTTAATGTAC CTGAGGGTAG TGCCGGTGCA GATGCAGGAC TACAAGTAGG GGATATCATC ACCCAAATTG ATGGTGAAAA TGTTGTATTT GCAAGAGATA TATCGACGCA TTTTGATTTC AAGCCAATTA AGTCACAGAA CCCAATTACA GTTAAATTTA AGAGAAATGG TGAGAAGTTA TCAACAACAT TAATACCAAG CGCTGAAAAA CGCTATATGC TAGGTATTTC TTATGCTCCA GATTCTCAAG GAGAAGCTCA GATTACTTTA CTAGAGAGCT CTGCTTTTAA AGACGCTGGT ATCAAGAATG GTGATGTCAT TACCGCAATT AATGGGACTG AGGTTAAGAC TAGCGCGGAA TTTAGTTCTT ATTTAGAAAG TCATCCACTC GATGGATCTG CGCTTTCTAT TACCTATACA CACAATGAAA AATCAAATAC TGTGGATGTT ACACCACGTA TGACGGAGTG GTATACCATT GGATTTAACT ATAACCAAGG ATATGAAAAA ACAGGTGTTT TTGGAGTTGT TCGTTATAGT ATTTCAGAAG TCCGTTACTG GATAGAAACA ACAGTAAAAA GCCTTGGTAA GCTCTTTACT GGCAAGGTTG GAGCAGATGA ACTGGGAGGA CCAGTACGAA TTGTTAGCGA GCTTGGAAGT GTAGTAGATG CAAAACAAGA CATTGGTATT AAAAATGTTA TTATCTTACT CTTTAACTGG GGTATTTTAT TAAGTGCAAA CCTTGGAGTA ATGAATCTCC TTCCTATCCC AGCACTAGAT GGTGGAAGAT TGATATTCTT AATCATTGAA GCAGTACGTG GAAAGCCATT AAATAGAGAA AAAGAAGGCT TTGTTCACAT GCTTGGGTTT ATTGCTTTGA TGATATTAAT GGTATTCTTA TTCTTTAATG ATATTAAGAA TGTTTTCTTC TAG
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Protein sequence | MKIIVALLIF GVIITFHELG HFLLAKKNGI VVTEFSIGMG PRLFSKVYHD TRYSLKLLPI GGSCMMLGED EVNDNEGAFN NKSVWARISA IFAGPLFNFI LAFFLALFVV GMVGYDPARV VNVPEGSAGA DAGLQVGDII TQIDGENVVF ARDISTHFDF KPIKSQNPIT VKFKRNGEKL STTLIPSAEK RYMLGISYAP DSQGEAQITL LESSAFKDAG IKNGDVITAI NGTEVKTSAE FSSYLESHPL DGSALSITYT HNEKSNTVDV TPRMTEWYTI GFNYNQGYEK TGVFGVVRYS ISEVRYWIET TVKSLGKLFT GKVGADELGG PVRIVSELGS VVDAKQDIGI KNVIILLFNW GILLSANLGV MNLLPIPALD GGRLIFLIIE AVRGKPLNRE KEGFVHMLGF IALMILMVFL FFNDIKNVFF
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