Gene Cphy_2542 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCphy_2542 
Symbol 
ID5741820 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium phytofermentans ISDg 
KingdomBacteria 
Replicon accessionNC_010001 
Strand
Start bp3112655 
End bp3113005 
Gene Length351 bp 
Protein Length116 aa 
Translation table11 
GC content27% 
IMG OID641293632 
Productpeptidoglycan-binding LysM 
Protein accessionYP_001559642 
Protein GI160880674 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.0261672 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGAGAGA GAAGTGTTAG AAATTATTCA GAAGAAATTA TAAGTTTTAT GAAATATCAC 
TTTAATCATA AGGCAATAGG TTTTTTATTT GTTGTCATTA TATTATTTTA TCTAGTATCT
ATTATTCCTA CGAAGATAGC TTATGCTGAT CAGAATACCG TAAGTTATAA AACTTTTCAA
AGTGTGGAAA TCAAGGCAGG GGATACTCTT TGGTCTATTG CTACGAAGTA TTATACAGAA
GAATATAAAA GTATACAAAA TTATATTGAA GTAATAAAAG AAAGTAATTC TTTAAAAAGT
GATACCATAC ATAGTGGATG TTATTTGATT ATTCCGTACT ATCAGAACTA A
 
Protein sequence
MRERSVRNYS EEIISFMKYH FNHKAIGFLF VVIILFYLVS IIPTKIAYAD QNTVSYKTFQ 
SVEIKAGDTL WSIATKYYTE EYKSIQNYIE VIKESNSLKS DTIHSGCYLI IPYYQN