Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cphy_2384 |
Symbol | |
ID | 5742454 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium phytofermentans ISDg |
Kingdom | Bacteria |
Replicon accession | NC_010001 |
Strand | - |
Start bp | 2939254 |
End bp | 2940348 |
Gene Length | 1095 bp |
Protein Length | 364 aa |
Translation table | 11 |
GC content | 37% |
IMG OID | 641293474 |
Product | NLP/P60 protein |
Protein accession | YP_001559484 |
Protein GI | 160880516 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0791] Cell wall-associated hydrolases (invasion-associated proteins) |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.0000000473535 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAGCAGG CTATAAAGAA AGTAACGACA GTCATGACTA TAGCAGCGGT TTTAGTTTGT TCTTCGCAAG CTATCACTAC GAAGGCAGAA GAAATAAAAG AGGAAAAATC CTTAGGTGGA TTATCTAAAG TTTTAGATGA CTATAACAAC GAAGGTATCT CAAAAAAATC AGATTATACA ACTTTATTAT CCACTCAGAT TTCTATTCCC GAGAATATAG CAATTGCGAA ATGCAATGAT TATGTTAATA TAAGAGAAAA AGCAGGCACC TCCTATAATA TCGTCGGTAT CTTAACAAAA GATTCATACG GTATTGTTTT AGAAGTTACA GATGGATGGG CAAAGATACA ATCTGGCTCT GTAACAGGAT ACGTTTCAAC GGATTATCTC TATATGGGAA CGGAAGGTGT AGCAAAGGCA AAAGAGTTAG CTAGTCTATT AGCAACTGTT ACAGCAAACT CTGTTAATGT AAGAAAAGAA CCATCTACCC TCACAAGAGA TAATATAATC GAGGAAGTAG TAAAAGGAGA AGACCTCGCA GTATTAAGTG CAGAGGTAGT TACGAAAAAT GACCCAGGTG CTGTTCTCTG GGTAAAGGTT GCATTGGATG ATTCTGAAGG AGAAGAAGTC ATTGGATATG TAGCAAAGGA TTATGTCGAT GTAGGATTCA AATGGAAATC TGCTTCTAAA GTAGATATTG AAGTTGCGAA CTCTTCACCG TTACGATATA ACTTAGTGAA TGAATCGAAA AAATACATAG GATTACGTTA TGTTTGGGGT GGTACTAGTT TAACCACAGG TGCAGATTGC TCCGGATTTG TATGGGCTGT CTATAAAAAG TGCGGATTGA ATGCATCAAG TATTGGACTT CCAAGAACCT CTTCTGAAAT GGCTAGTGGA GGGACCAAAG TTACCAGTGC AACAATTAAA CCAGGAGATT TAGTTTTCTA TGGTGACAGT AGCGGACGTG TAAATCATGT AGCGATGTAT ATTGGAAACA ATCAAGTAAT TCATGAGAGT GGAAGACAAA CAGGCTGTAA GATTTCTAAT ATGTATTATC GTAAAGTAGT TACAATGAGA AGTTATTTAC AGTAG
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Protein sequence | MKQAIKKVTT VMTIAAVLVC SSQAITTKAE EIKEEKSLGG LSKVLDDYNN EGISKKSDYT TLLSTQISIP ENIAIAKCND YVNIREKAGT SYNIVGILTK DSYGIVLEVT DGWAKIQSGS VTGYVSTDYL YMGTEGVAKA KELASLLATV TANSVNVRKE PSTLTRDNII EEVVKGEDLA VLSAEVVTKN DPGAVLWVKV ALDDSEGEEV IGYVAKDYVD VGFKWKSASK VDIEVANSSP LRYNLVNESK KYIGLRYVWG GTSLTTGADC SGFVWAVYKK CGLNASSIGL PRTSSEMASG GTKVTSATIK PGDLVFYGDS SGRVNHVAMY IGNNQVIHES GRQTGCKISN MYYRKVVTMR SYLQ
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