Gene Cphy_2384 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCphy_2384 
Symbol 
ID5742454 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium phytofermentans ISDg 
KingdomBacteria 
Replicon accessionNC_010001 
Strand
Start bp2939254 
End bp2940348 
Gene Length1095 bp 
Protein Length364 aa 
Translation table11 
GC content37% 
IMG OID641293474 
ProductNLP/P60 protein 
Protein accessionYP_001559484 
Protein GI160880516 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0791] Cell wall-associated hydrolases (invasion-associated proteins) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000000473535 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGCAGG CTATAAAGAA AGTAACGACA GTCATGACTA TAGCAGCGGT TTTAGTTTGT 
TCTTCGCAAG CTATCACTAC GAAGGCAGAA GAAATAAAAG AGGAAAAATC CTTAGGTGGA
TTATCTAAAG TTTTAGATGA CTATAACAAC GAAGGTATCT CAAAAAAATC AGATTATACA
ACTTTATTAT CCACTCAGAT TTCTATTCCC GAGAATATAG CAATTGCGAA ATGCAATGAT
TATGTTAATA TAAGAGAAAA AGCAGGCACC TCCTATAATA TCGTCGGTAT CTTAACAAAA
GATTCATACG GTATTGTTTT AGAAGTTACA GATGGATGGG CAAAGATACA ATCTGGCTCT
GTAACAGGAT ACGTTTCAAC GGATTATCTC TATATGGGAA CGGAAGGTGT AGCAAAGGCA
AAAGAGTTAG CTAGTCTATT AGCAACTGTT ACAGCAAACT CTGTTAATGT AAGAAAAGAA
CCATCTACCC TCACAAGAGA TAATATAATC GAGGAAGTAG TAAAAGGAGA AGACCTCGCA
GTATTAAGTG CAGAGGTAGT TACGAAAAAT GACCCAGGTG CTGTTCTCTG GGTAAAGGTT
GCATTGGATG ATTCTGAAGG AGAAGAAGTC ATTGGATATG TAGCAAAGGA TTATGTCGAT
GTAGGATTCA AATGGAAATC TGCTTCTAAA GTAGATATTG AAGTTGCGAA CTCTTCACCG
TTACGATATA ACTTAGTGAA TGAATCGAAA AAATACATAG GATTACGTTA TGTTTGGGGT
GGTACTAGTT TAACCACAGG TGCAGATTGC TCCGGATTTG TATGGGCTGT CTATAAAAAG
TGCGGATTGA ATGCATCAAG TATTGGACTT CCAAGAACCT CTTCTGAAAT GGCTAGTGGA
GGGACCAAAG TTACCAGTGC AACAATTAAA CCAGGAGATT TAGTTTTCTA TGGTGACAGT
AGCGGACGTG TAAATCATGT AGCGATGTAT ATTGGAAACA ATCAAGTAAT TCATGAGAGT
GGAAGACAAA CAGGCTGTAA GATTTCTAAT ATGTATTATC GTAAAGTAGT TACAATGAGA
AGTTATTTAC AGTAG
 
Protein sequence
MKQAIKKVTT VMTIAAVLVC SSQAITTKAE EIKEEKSLGG LSKVLDDYNN EGISKKSDYT 
TLLSTQISIP ENIAIAKCND YVNIREKAGT SYNIVGILTK DSYGIVLEVT DGWAKIQSGS
VTGYVSTDYL YMGTEGVAKA KELASLLATV TANSVNVRKE PSTLTRDNII EEVVKGEDLA
VLSAEVVTKN DPGAVLWVKV ALDDSEGEEV IGYVAKDYVD VGFKWKSASK VDIEVANSSP
LRYNLVNESK KYIGLRYVWG GTSLTTGADC SGFVWAVYKK CGLNASSIGL PRTSSEMASG
GTKVTSATIK PGDLVFYGDS SGRVNHVAMY IGNNQVIHES GRQTGCKISN MYYRKVVTMR
SYLQ