Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cphy_2351 |
Symbol | |
ID | 5745410 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium phytofermentans ISDg |
Kingdom | Bacteria |
Replicon accession | NC_010001 |
Strand | - |
Start bp | 2903218 |
End bp | 2904213 |
Gene Length | 996 bp |
Protein Length | 331 aa |
Translation table | 11 |
GC content | 34% |
IMG OID | 641293441 |
Product | LacI family transcription regulator |
Protein accession | YP_001559451 |
Protein GI | 160880483 |
COG category | [K] Transcription |
COG ID | [COG1609] Transcriptional regulators |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.0288432 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGTATCGA TAAATGATGT AGCGAAAAAA GCAGGAGTAG CAAAATCAAC AGTATCGAAG GTTTTGAACA ACTATTCTTT AGTTAGCGAA GAGACCAGAT TAAAAGTTGA AAAGGCAGTG GAGGAATTGG GATATGTACC AAATTCAGTA GCTGTATCGC TCTCTAAGAA AGTATTTAAT AGAGTAGGCT TAATTGTTGA TATCCGCCAT AATAGTCAAT TTGTTGATGA AATCAGCATG CAGTACTTGA CAGGTGCCTT TGAAAAAGCA AAAGAATATC AAATTGAAGT GGTAACTTTC TTCAGTTCCC AGTTTGATGA GATGAATTAC AAACAAGTAA CAGCGTATCT AAAATCTCAG AGGATTAATT GTTTAATTAT ATACAACTTG TCCATAGAGA ATAAGAATTT ATATAAAATA ATTGAGAAAC AGGAATTTAA CTGTGTCTTA GTTGATTCTC CTATTACAAA TGATAGGACT TCCTCAGTAT CCCTTGATCA TTTTTCTGCC CAATACGAAG TTGCTAAAAA AACCTTAGAG GAGAATATCT ACATTGATAG GGTATTGTAT ATAGCAGGCG GAGCAGGTGG ATATATTACC AATAGACGTC TGGATGCCAT GAGAAAGCTA CAGGAAGAGC TGGATTTTGA ACTTATTGTA GAATATGGTG ATTTTAACGA ATATAAAGCT AGGGAAATTA CTTTTAAAAA TGGCGAAAAG TCAAATGCAA TTGTTTGTGC ATCGGATTTA ATGGCAATTG GAGCTGTATT TGCTCTGATA GAAATGGATA TTTACAGACC GGTTTGCGGA TTTGATGGAA TTCGTTTAAT GGGTTATACC AAGATAGCCA TGAACACAGT AAAACAGAAC TTTAACCTAA AATCCAAACA GGCATTTGAT GAATTAAAGA AGTTACTTGA CGGAGAAAAG GGACAGCATA CGGAGATACC TTATGAGGTA TGTAAAATCG ATTATATGGA TGTTATTCAA AAATAA
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Protein sequence | MVSINDVAKK AGVAKSTVSK VLNNYSLVSE ETRLKVEKAV EELGYVPNSV AVSLSKKVFN RVGLIVDIRH NSQFVDEISM QYLTGAFEKA KEYQIEVVTF FSSQFDEMNY KQVTAYLKSQ RINCLIIYNL SIENKNLYKI IEKQEFNCVL VDSPITNDRT SSVSLDHFSA QYEVAKKTLE ENIYIDRVLY IAGGAGGYIT NRRLDAMRKL QEELDFELIV EYGDFNEYKA REITFKNGEK SNAIVCASDL MAIGAVFALI EMDIYRPVCG FDGIRLMGYT KIAMNTVKQN FNLKSKQAFD ELKKLLDGEK GQHTEIPYEV CKIDYMDVIQ K
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