| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphy_2213 |
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| Symbol | |
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| ID | 5744524 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium phytofermentans ISDg |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010001 |
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| Strand | - |
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| Start bp | 2730477 |
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| End bp | 2733857 |
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| Gene Length | 3381 bp |
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| Protein Length | 1126 aa |
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| Translation table | 11 |
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| GC content | 36% |
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| IMG OID | 641293308 |
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| Product | polysaccharide deacetylase |
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| Protein accession | YP_001559318 |
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| Protein GI | 160880350 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0726] Predicted xylanase/chitin deacetylase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.231382 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACAAGTA AAGTAAATAA GAAATTAATC ATTGTCATTA TTATTATAGT AAGTGCCATA
GTAATGATTA TCGGAATATC TTGGATGTTA CGAGGTAAGG ATGAAATCCA AACGGTTAGT
GGTAACAAGT ATGATGCGAA TGATATCATT GAAGTCGCTA TGAGAAAATT AAAAGAAGGC
GGTTCGGCAG AAGTTGTTTC CAATATTCAG ACAACGGATA AATTAATTGC ATTAACCTTT
CAAGGATTGT CTGATGCGGA AACGAATCGA AAGATACTTG ACCTGATGGC AGAGTATGAA
AGAAAAGGAA CATTTTTTGT TCCTGGTATT CTGGCAGCCG AGGATTCTAA TACAATCATT
GCTATGAATT CCGAAGGGCA TAGGATAGGG AACAACACCT TGTCGGAAAC GAAGCATATG
GAAGAGTATA CAAAAGAGGA TTTGGTTAAG GATTTTAGCA GAACCAATAA TATCATTCAA
ACTATAATCG GTAAAGCACC TAATACTTTA TTGTGTAATT CAACAACACA CACACCCGAA
TTATTACAAG CTGCGCATGC ATGCGGAAAT GATAAGGTAG TTAAGAGTAC ACATTATCTA
AGTTATCAAA GTTTCAAGAA TTATAATCAA GTGCTTGGCT ATATCAAAGG TTTAGAGAAA
GGTGCAATCC TAACAATTAA AATGGATGGT ACTCTGGATG AAGAAGAATA TGAAGCTCCG
GTAAAACCAG ATAAACCTGC AATTGATAAG GCACCAAGCA TTAATTCAGA GGATATGTCA
TTAGATTCTT TAACGAAAGA AGAAAGACTG TTAAAGATGA TGGAATGGAT TTTACAGGCA
TTGAAAGAAA CAGAATATAA GACGGTATTT GCTGAAGATC TGTCTGCCTA TGATGATGCT
GATTTCAATA TGAATTTTAG TAACTTGAGA GATCAAAATG CCGGAAAATT GTCAAAGGTT
TATACAAATA TTAATACGAC GCAGCATATG ATGTCGTTTG CCTTTCGAGG AATAGAAGAT
GAGGAGCAGT TGACCGAAAT ACTGAATTTC TTGGAAGAAA ATCATTTACT TGCAACTTTC
TTTGTCACAG TAAATGATAT TGTAAATTAC CCTGAAAGAA TTGATAAGAT TTTAGAAAAG
AAGCAAAATA TCGCCAACGG AGGACTATCA GGAAAAGACC TTACCACAAT GAGTTTTCAA
GAGATTTGTT TAGAAATATA TAAGTGTGAT AAACTTTTAA AGGAAATCTA TGGTGTTCAT
ACCAATATAT TTATGCCTGT GTATGGCAAA TCGAATGAGT TAATTCAAGA GGCTGCCTCC
ATATTCCATT ATGATGTTGT CACATATAGT AAGAATCCAA TCACGGATGA TGCAAAATCC
ATAGATGACA TTATGGGATA TTATAAAAAT GGTTTTAAAG ACGGAGATAT CATCTATTTT
AGAATTGGAT ATCATAAGGA TTTGCTAAAT ATTGTGAAAC AAACCTATGA AATGATCGCA
GAAGGAACTT ACGCAATCTG TGATATACCT ACTTTGCTGG TACACGAATC AAATGAAACG
GAAATGGTAT CAAATAACGG TAACAGTACG AAAGGTACGC AAACAGATAG CAAGAATACT
AACAAACCAA ATGGTAATAC GGCGAACAAT CAGAATTCCG GTGGTTCAGA TACGAACACT
AAAAAGGAAG CTTATACGGT TCAATATTTA GATTCCTTGC GCAGGAAGAA TAAAGGAGTA
AAAGCGAAAG AGCAACATAC CGTATATACA ACAGAACAAG CATTGAGCTA TACCTTCTAT
GGAATAAATC ATAATGATAT ATTAAAAGAT GTCTTGCATA GCTTGAAGCT TCTGAATGCA
AAAGGAACGT TCTTTGTTAC TGAAAAAGAT ATCATAAACA GTGCTGATGC AATTAAGCAA
ATTGCAAAGG AAGGGCATGA AATAGGGATA TGCCTGATGA CTTCGACCGG TACGGATTTC
TACTCCATGC TTAGTAGCAT TTTGACAATA CAGAAGGAAG TAGAAGCCTT ATGCGGTCAA
AAACCAACCT TAGTAAGATA TGCATATGAA GTGGAAATGT CAGATGAAAT GCTTGAAGCA
GTATCCAGTG CAAGGTGTAG GGTAATCTGG CAGGATCTGT CTTTGGCTAG CTCAAAACTA
GGAATAGATG CCACTTTAGA AGATGTAATT AAAAACGCAT TTAATGAGGG AAATATCACA
GCTCGTCGAG GGTATATCAT CTATTATCGG ATGGACTATT ATTCCAATCC TACTTTGATT
GGAAAGCTTA TGCTGAATAT TGCAAAAGAG CGTATTGACA CGATTGCCTA CAAGGATGGT
ATTGCTGACA ATGGCTCCAC GTATTCAATT AAGACTTTAG GAGCTCTACT TAGCAGTGAT
ATGGTTTATT CCTATCCTGT TTCGGATAAG AAAGTACTGC CATCCCTTAA GAACGCAATC
TATCCCGGAC ATTTTGACGG ACTCACGGAT GCATTAAAGT TTCAATTTGT TCAGGGTCGA
TATATCGGAA CACCAAGTAT TAATTCCAGT TCCACATTAC CGGGATTTTC AGACGAAGAG
CTTGATGAGC TTGATAAGAC AGGGGCATTT ACGGATGATA AAGTATTATT CTTAACTTTT
GATGACTGGG GTTCTGATAA GGCGGTTAAC CAGCTGTTAT ATGTATTAAA TAAATATAAT
ATTAAAGCAT CGTTCTTTGT CAGAACGAAT TATGTAGAGA GTAATCCAAA TCTTTTACGT
GCCATTGCTG AGGCCGGACA TGATGTTGGT AGCCATACTG ATATGCACAA CCCGTTTGCA
ACCACGGATA TTATACAGGA TGAAAATGAC AATAGAGCAA TTTATTATTC ACTAACCGAT
GATGAGATAA AAGAAAGAAA AGAGGATTTG CTTATCTCTT ATCAGAAGCT GCTATCCATT
ATTGGAGATG TTCGTTTTAA TGGAATACCG TCATTAACAA AAATCCTAAG ACCTCCAACC
TTAGCAATGA GCAGTAGTGG TATGGAAGCG ATTCTTGATA TGGGATTTAA GTATATTGTA
AGCGGTGACT TCAGTACCCA TGATTATGAG GAGGTTGATC CAAAAGCACT TGCAAATACA
ATAATGAACG GAATTAAGTT AGACGACGGA GAACGGAGAA CTTTGCATAA AGGCAGTGTA
CTTGTAATGC ATATGTCAGA TAATGATCTT ATGCCAAAAG CGCAGAATGT GACAGCAGAA
GCTTTAGATA TTGTTATTCC AAAGTTAATC GCTGAGGGTT ATCAATTTGC AAAGCTTAGT
GACTATCTGA CGGATAGCAG AGGAGAAGTT TATAACTTAA GCCAAAGTTA TATCGATTGG
CTAGCACAAC AAGGAAATTG A
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| Protein sequence | MTSKVNKKLI IVIIIIVSAI VMIIGISWML RGKDEIQTVS GNKYDANDII EVAMRKLKEG
GSAEVVSNIQ TTDKLIALTF QGLSDAETNR KILDLMAEYE RKGTFFVPGI LAAEDSNTII
AMNSEGHRIG NNTLSETKHM EEYTKEDLVK DFSRTNNIIQ TIIGKAPNTL LCNSTTHTPE
LLQAAHACGN DKVVKSTHYL SYQSFKNYNQ VLGYIKGLEK GAILTIKMDG TLDEEEYEAP
VKPDKPAIDK APSINSEDMS LDSLTKEERL LKMMEWILQA LKETEYKTVF AEDLSAYDDA
DFNMNFSNLR DQNAGKLSKV YTNINTTQHM MSFAFRGIED EEQLTEILNF LEENHLLATF
FVTVNDIVNY PERIDKILEK KQNIANGGLS GKDLTTMSFQ EICLEIYKCD KLLKEIYGVH
TNIFMPVYGK SNELIQEAAS IFHYDVVTYS KNPITDDAKS IDDIMGYYKN GFKDGDIIYF
RIGYHKDLLN IVKQTYEMIA EGTYAICDIP TLLVHESNET EMVSNNGNST KGTQTDSKNT
NKPNGNTANN QNSGGSDTNT KKEAYTVQYL DSLRRKNKGV KAKEQHTVYT TEQALSYTFY
GINHNDILKD VLHSLKLLNA KGTFFVTEKD IINSADAIKQ IAKEGHEIGI CLMTSTGTDF
YSMLSSILTI QKEVEALCGQ KPTLVRYAYE VEMSDEMLEA VSSARCRVIW QDLSLASSKL
GIDATLEDVI KNAFNEGNIT ARRGYIIYYR MDYYSNPTLI GKLMLNIAKE RIDTIAYKDG
IADNGSTYSI KTLGALLSSD MVYSYPVSDK KVLPSLKNAI YPGHFDGLTD ALKFQFVQGR
YIGTPSINSS STLPGFSDEE LDELDKTGAF TDDKVLFLTF DDWGSDKAVN QLLYVLNKYN
IKASFFVRTN YVESNPNLLR AIAEAGHDVG SHTDMHNPFA TTDIIQDEND NRAIYYSLTD
DEIKERKEDL LISYQKLLSI IGDVRFNGIP SLTKILRPPT LAMSSSGMEA ILDMGFKYIV
SGDFSTHDYE EVDPKALANT IMNGIKLDDG ERRTLHKGSV LVMHMSDNDL MPKAQNVTAE
ALDIVIPKLI AEGYQFAKLS DYLTDSRGEV YNLSQSYIDW LAQQGN
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