Gene Cphy_2161 details

Gene Information

• Locus tag: Cphy_2161
• ID: 5744167
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Clostridium phytofermentans ISDg
• Kingdom: Bacteria
• Replicon accession: NC_010001
• Strand: +
• Start bp: 2670607
• End bp: 2671065
• Gene Length: 459 bp
• Protein Length: 152 aa
• Translation table: 11
• GC content: 33%
• IMG OID: 641293256
• Product: cupin 2 domain-containing protein
• Protein accession: YP_001559266
• Protein GI: 160880298
• COG category: [S] Function unknown
• COG ID: [COG3837] Uncharacterized conserved protein, contains double-stranded beta-helix domain

Plasmid Coverage information

• Num covering plasmid clones: 12
• Plasmid unclonability p-value: 0.0191913
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGTTAATA TATTTAACAT GGATAATATT CCTAATGAAT ACACCATGGA TTTTTTAGGA 
AAAGCTAATA CATCTTATTT AGGTAAATTA GCGGGAAGCG ATAAACTTTA TGTCAATATA 
GATAGAATAT CACCAGGGGC TAAGAGTGCT AAATATCACA GTCATACAAA GCAAGAAGAA 
TTTTTCATAA TTCTTAGCGG GTATGGGACT TTAAGAATAG ATGGAAAAGA ATATTTAGTA 
AAGAAAGGGG ATTTTGTTTC TAAGCCAGCC GGGAAAGGAA TAGCGCACCA ATTTATCAAT 
ACTGGAGAGG AAGTCCTAGA GATACTTGAT GTCGGTACCA AAGAGGAGGG CGACATAGCG 
TATTATCCTG ATGAAGAGAT ATATTATTTT AGTGATGAAA ACCTTGTTTT TAATGTGAAT 
AGTAAATTAA GTACATGGGA TTCTGAACCA AATAAATGA 

 

Protein sequence

MVNIFNMDNI PNEYTMDFLG KANTSYLGKL AGSDKLYVNI DRISPGAKSA KYHSHTKQEE 
FFIILSGYGT LRIDGKEYLV KKGDFVSKPA GKGIAHQFIN TGEEVLEILD VGTKEEGDIA 
YYPDEEIYYF SDENLVFNVN SKLSTWDSEP NK