Gene Cphy_1850 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCphy_1850 
Symbol 
ID5743139 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium phytofermentans ISDg 
KingdomBacteria 
Replicon accessionNC_010001 
Strand
Start bp2279006 
End bp2279350 
Gene Length345 bp 
Protein Length114 aa 
Translation table11 
GC content34% 
IMG OID641292947 
ProductHxlR family transcriptional regulator 
Protein accessionYP_001558958 
Protein GI160879990 
COG category[K] Transcription 
COG ID[COG1733] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATTCATA TCGAACAAGA AACATATGAT TGTCCAGTCG AGGCACTTGC TAATTTACTA 
GGGAAAAAGT GGATAGCAAC GATTATATGT ACTATTAAGA ATGAGAAGAA GAGATTTGGT
GAATTAGAAA AAGAGTTAGA TGGTTGTACA AGAAAAATGC TTACTCAACA ACTTGACTTA
CTTATGAAGC AGGAAATTGT ACTTAATCAA AAAGAAGTTA ATGGAAACAG TATCGAATCA
CATTATTATC TAAGTGAAAA GGGACTAACC TTACTGCCTT TAGTGGAAGA GATGATTGCA
TGGGGGAGTA ATAATCTAAA GTGCGATAAA TCGGGACGTT ACTAA
 
Protein sequence
MIHIEQETYD CPVEALANLL GKKWIATIIC TIKNEKKRFG ELEKELDGCT RKMLTQQLDL 
LMKQEIVLNQ KEVNGNSIES HYYLSEKGLT LLPLVEEMIA WGSNNLKCDK SGRY