| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphy_1704 |
|---|
| Symbol | |
|---|
| ID | 5741535 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium phytofermentans ISDg |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010001 |
|---|
| Strand | - |
|---|
| Start bp | 2090169 |
|---|
| End bp | 2091248 |
|---|
| Gene Length | 1080 bp |
|---|
| Protein Length | 359 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 40% |
|---|
| IMG OID | 641292804 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001558815 |
|---|
| Protein GI | 160879847 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG2706] 3-carboxymuconate cyclase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTATGATA CGATTGATTA TCGGCATGGA TACATGATTT ACTCTACGTC GAATGCTGCT
GATTATAATG AAGTTGTAGC CATTCGCCAT GATTCTGGTG ATAATTTTAC ATTTATTAAG
GCTTATAAAA CAGGCGGTAA AGGCACTGGA ACCAAAACTG TTGATCCTCT TGGTTCACAG
GGATCAATCA TACTATCAGA TGATGGACAT TTCCTTTTCG TCGTGAACGC AGGCAGTAAT
AGTATCACTA GCTTCAAAAT CACCGACTCG GGAACCCTGA TTCTTGCAGA CGTGAAGCAG
TCCGATGGTT TCTTCCCAAA AAGCCTAACA ACTCACCGTA ATTTTCTCTA TGTAGCAAAT
GCAGGCAATG GGAGCAGCAT TGGCTCCAAT ATAACTGGTT TTCAGGTGGA TGAAAACGGT
AGGCTTACCG AAATCATTGA CTCCACTAAA TCATTGAGTT CAAAAAATGC CAGACCAACA
TGTATTGTCA TCAATTATAA TGGTAAAAAA ATAGCGGTCT CCGAGCTGAA CACTAACCTA
ATCAGTGTAT TTACCGTTCA ACCAGACGGA TCCCTCACCG GTCCTATCGT CAGCAATTCT
AGCGGGTCCG GACCTTTTGG CTCTGTTTTC TTAACAAATG AAATATTACT GGTTACGGAG
GCTGGAACAA ATGCATTATC TTCATACATA GTTAATCACA ATGGTACACT TTCTGTAATC
AGTTCATCCG TTTTGAATTT TCAGGCAGCT ACCTGTTGGG TTGCAATATC TGAAGACGGA
CGTTTTGCTT ATACTTCCAA TGCTGGTACC CACACAATAA CAACGTATGA AGTTGAATAT
GATGGACATG TGAGTGTTTC AAATATTATT TATAGCACGA AAGATGGGTC TAATGCACCA
ATTGATAGTG GCGTTTGTAC CAACTACCTG TATGTACTCA ATGGAAATGA GGGATCCATC
AGCGTTTTCA TTACTGGCCG AGAAGGCAAA TTAATCCGAA AACAAGTTTT CAGCAATACA
CAACTTCCGA ATTTAGGTTC ACAAGGTTTG GCGATCCTAT GCCTACCAAA TAGAAATTAG
|
|---|
| Protein sequence | MYDTIDYRHG YMIYSTSNAA DYNEVVAIRH DSGDNFTFIK AYKTGGKGTG TKTVDPLGSQ
GSIILSDDGH FLFVVNAGSN SITSFKITDS GTLILADVKQ SDGFFPKSLT THRNFLYVAN
AGNGSSIGSN ITGFQVDENG RLTEIIDSTK SLSSKNARPT CIVINYNGKK IAVSELNTNL
ISVFTVQPDG SLTGPIVSNS SGSGPFGSVF LTNEILLVTE AGTNALSSYI VNHNGTLSVI
SSSVLNFQAA TCWVAISEDG RFAYTSNAGT HTITTYEVEY DGHVSVSNII YSTKDGSNAP
IDSGVCTNYL YVLNGNEGSI SVFITGREGK LIRKQVFSNT QLPNLGSQGL AILCLPNRN
|
|---|
| |