Gene Cphy_1686 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCphy_1686 
Symbol 
ID5741517 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium phytofermentans ISDg 
KingdomBacteria 
Replicon accessionNC_010001 
Strand
Start bp2068969 
End bp2070048 
Gene Length1080 bp 
Protein Length359 aa 
Translation table11 
GC content41% 
IMG OID641292786 
Producthypothetical protein 
Protein accessionYP_001558797 
Protein GI160879829 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2706] 3-carboxymuconate cyclase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.0479604 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTATGATA TGATAGATTG TAGGCATGGA TACATGGTTT ATTCTATGTC GAATGCTGCT 
GATTGTAATG AAGTTGTAGC TATTCGTCAT GATTCCGGTG ATAATCTTAC ATTTGTTAAG
GCTTACAAAA CAGGCGGTAA AGGCACTGGT GCCCAAGCTG TTGATCCCCT TGGATCACAG
GGATCAATCA TACTATCAGA TGACGGACAT TTCCTCTTCG TCGTGAACGC AGGTAGCAAT
AGTATCACTA GCTTCAAAAT CACCAACTCG GGAACCCTGA TTCTTGCAGA CGTGAAACAA
TCCGGCGGTT TCTTCCCAAA AAGCCTAACA ACTCAAAGTA ATCTTCTCTA TGTGACAAAT
GCAGGCAATG GGAGCAGCAT TGCGTCCAAT ATAACTGGTT TTCAGGTGGA CGAAAACGGC
AAGCTTTTCG AAATCATTGG CTCTACTAAA TCATTGAGTT CAAAAAATGC CAATCCAACA
TGCATTGTCA TCAATTATAA CGGTAAAAAA ATAGCAGTCT CCGAGCAGAG CACTAACCTA
ATCAGTGTAT TTACCGTTCA ACCAGACGGA TCCCTCACCG GCCCTATCGT CAGTAATTCT
AGCGGTGCTG GACCTTTTGG CTCTGTTTTC TTTACAAATG AAATTTTACT GGTTACGGAG
GCTGGAACAA ATGCATTATC TTCTTATAAA GTTAATCATA ATGGAACACT TTCTGTAATC
AGTTCATCCA TTTTGAATTT TCAATCAGCT ACCTGTTGGG TTGCACTATC TGAAGACGGA
CGTTTTGCCT ATACTTCCAA TGCTGGCAGC CACACAATAA CAACGTATGA AGTTGAATAT
GATGGACATG TGAGCGTTTC AAATATTGTT TATAACACGA AAGATGGGTC TGGTGCACCA
ATTGATAGTG GTGTTTGTAC CAATTATCTG TATGTACTAA ACGGAAATGA GGGATCCATC
AGCGTTTTCA TCACTGGCCG AGAAGGCAAA CTAATCCGAA AGCAAGTTTT CAGCAACACA
CAACTTCCGA ATTTGGGTTC ACAAGGTTTG GCGATCCTAT GCTTACCAAA TAGATATTAA
 
Protein sequence
MYDMIDCRHG YMVYSMSNAA DCNEVVAIRH DSGDNLTFVK AYKTGGKGTG AQAVDPLGSQ 
GSIILSDDGH FLFVVNAGSN SITSFKITNS GTLILADVKQ SGGFFPKSLT TQSNLLYVTN
AGNGSSIASN ITGFQVDENG KLFEIIGSTK SLSSKNANPT CIVINYNGKK IAVSEQSTNL
ISVFTVQPDG SLTGPIVSNS SGAGPFGSVF FTNEILLVTE AGTNALSSYK VNHNGTLSVI
SSSILNFQSA TCWVALSEDG RFAYTSNAGS HTITTYEVEY DGHVSVSNIV YNTKDGSGAP
IDSGVCTNYL YVLNGNEGSI SVFITGREGK LIRKQVFSNT QLPNLGSQGL AILCLPNRY