| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphy_1603 |
|---|
| Symbol | |
|---|
| ID | 5744425 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium phytofermentans ISDg |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010001 |
|---|
| Strand | - |
|---|
| Start bp | 1978474 |
|---|
| End bp | 1978995 |
|---|
| Gene Length | 522 bp |
|---|
| Protein Length | 173 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 641292705 |
|---|
| Product | 4-vinyl reductase 4VR |
|---|
| Protein accession | YP_001558716 |
|---|
| Protein GI | 160879748 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1719] Predicted hydrocarbon binding protein (contains V4R domain) |
|---|
| TIGRFAM ID | [TIGR02019] bacteriochlorophyll 4-vinyl reductase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAATTATG AAAACAAACC AACCAAGTTT ACTTGGGAGG GGCTTGGAGA TATTGACGCA
GGAAGAGGTA CTTTGGGGCC GGACATGCCG GTATTCGTGT ACCGACTGTT CCAATTCACC
CTAAAGGATA TCCTGGACAG AGAATATGAC GAAGAGACTT CCAATAACTT GTACCGGGCA
GCTGGTCATC TGGCTGGTAC AGAACTGGCA AAAAATATCT TAGATCTTTC CGGCGATTTT
GATTTCTTTG TCGCCAACCT AACCAACAAG CTAAAAGAGT TGAAAATCGG TATACTACGT
ATTGAAAAAG CCGATCTGGA TGCATTTTCC TTTACCCTGA CGGTTTCAGA AGATCTAGAT
TGTTCGGGGC TACCACTTTA TGGAGAAACC GTATGTGATT ATGATGAAGG TTTTATTGCA
GGCATTCTTG AAACGTATAG TGGGCAACCT TTTACGGTTA GGGAGGTCGA CTGCTGGGCA
ACCGGTGCTA GAACCTGTCG GTTTTCCGCT GAATTAAAAT AA
|
|---|
| Protein sequence | MNYENKPTKF TWEGLGDIDA GRGTLGPDMP VFVYRLFQFT LKDILDREYD EETSNNLYRA
AGHLAGTELA KNILDLSGDF DFFVANLTNK LKELKIGILR IEKADLDAFS FTLTVSEDLD
CSGLPLYGET VCDYDEGFIA GILETYSGQP FTVREVDCWA TGARTCRFSA ELK
|
|---|
| |