| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphy_1586 |
|---|
| Symbol | |
|---|
| ID | 5744408 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium phytofermentans ISDg |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010001 |
|---|
| Strand | + |
|---|
| Start bp | 1951989 |
|---|
| End bp | 1953530 |
|---|
| Gene Length | 1542 bp |
|---|
| Protein Length | 513 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 35% |
|---|
| IMG OID | 641292688 |
|---|
| Product | ABC transporter related |
|---|
| Protein accession | YP_001558699 |
|---|
| Protein GI | 160879731 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG1129] ABC-type sugar transport system, ATPase component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.192443 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGGAAAACA TAATATTAGA GATGAGGAAC ATAACCAAAA CATTTCCCGG AGTTAAGGCA
TTAGATAATG TTAACTTAAA AGTAAAAGAG GGAGAGATAC ATGCACTTGT AGGTGAGAAC
GGTGCTGGAA AATCGACCTT AATGAATGTA CTTAGCGGTA TCTACCCATA TGGATCGTAC
GAGGGAGAAA TTATATATCA AGGAGAGTTA TGTAAATTCT CAAAAATAAA AGACAGTGAA
GAAAAAGGAA TTATTATTAT TCATCAGGAA TTAGCTCTCG TTCCTTATAT GAGTATTGCG
GAGAATATGT TTCTTGGCAA TGAACGAGGA AAACCATACG CAATCAACTG GAACGATACT
TATGGTTATG CAGATGAATT GCTTAAAATT GTAGGATTAA AGGAATCCTC AAGAACCCTA
ATAAAAGATA TCGGAATTGG AAAACAACAA TTAGTTGAGA TAGCCAAAGC ACTTTCAAAA
AAAGCGAAAC TATTAATCTT AGATGAACCG ACCTCATCAT TAAATGAATC GGAATCAAAG
AGTTTGCTTG ATTTATTATT ATCTTTTAAA AAAGAAGGAA TGACATCAAT CATTATCTCT
CATAAGTTAA ATGAGATTTC TTATGTTGCA GATAGGATTA CGATACTTAG AGATGGTTCA
ACTATTGAAA CACTAGATAA ATCAAAGGAT GATATTTCGG AAGAGCGAAT TATTAAAGGT
ATGGTAGGCC GTGACATGAC GGTACGTTTT CCAAAACGTG ACTCGCTAAT TTCAAATGAA
AATGTTCTAG AAATCAATGA CTTTACAGTT CACCATCCAA TGACTCCGGA ACGTAAAGTA
GTAGACCATG TTAGTCTAAC TTTAAAAAAA GGAGAGGTAG TAGGTATTGC TGGACTTATG
GGTGCCGGTA GAACAGAACT CGCTATGGGG CTGTTTGGAA AAGCTTATGG TAGAAATATA
TCAGGAGAAG TTAAGATTAA CGGAAAAGAA GTAACACTTC GTAAGGTAAA AGATGCGATT
GAGAACAGGC TTGCTTATGT AACGGAAGAT AGAAAAGGAA ATGGGTTAAT ACTAAGCAAA
TCGATTGCCA TGAATACTAC GTTATCAAGC TTAAAAAAAG TTAGCTACAA AGGAGTATTA
GATCGGGACA AGGAATATGA GGTGGCAAGT AATTATAAAG AAAAGTTAAA AACAAAGTGT
CCAACAGTTT GGCAAAATGT AGGAAACTTA AGTGGTGGAA ACCAGCAAAA GGTATTACTT
GCAAAATGGA TGTTTGCAAA TCCAGATATC TTAATTCTTG ATGAACCTAC CAGAGGAATA
GATGTAGGTG CAAAGTATGA AATTTATTGT ATTATTAATG AATTAGTTGC AGAAGGAAAA
TCCGTCATAT TAATCTCATC TGAATTACCA GAAATACTTG GAATGAGTGA TCGAATTTAT
GTCATGTGTG ATGGTAAGAT GGTTGGAGAA CTAGGAAAAG AAGAAGCAAC CTCTGAGACA
ATTATGTCAT TGATTCTGAA AGCTAGCAAT AAAGGAGCGT GA
|
|---|
| Protein sequence | MENIILEMRN ITKTFPGVKA LDNVNLKVKE GEIHALVGEN GAGKSTLMNV LSGIYPYGSY
EGEIIYQGEL CKFSKIKDSE EKGIIIIHQE LALVPYMSIA ENMFLGNERG KPYAINWNDT
YGYADELLKI VGLKESSRTL IKDIGIGKQQ LVEIAKALSK KAKLLILDEP TSSLNESESK
SLLDLLLSFK KEGMTSIIIS HKLNEISYVA DRITILRDGS TIETLDKSKD DISEERIIKG
MVGRDMTVRF PKRDSLISNE NVLEINDFTV HHPMTPERKV VDHVSLTLKK GEVVGIAGLM
GAGRTELAMG LFGKAYGRNI SGEVKINGKE VTLRKVKDAI ENRLAYVTED RKGNGLILSK
SIAMNTTLSS LKKVSYKGVL DRDKEYEVAS NYKEKLKTKC PTVWQNVGNL SGGNQQKVLL
AKWMFANPDI LILDEPTRGI DVGAKYEIYC IINELVAEGK SVILISSELP EILGMSDRIY
VMCDGKMVGE LGKEEATSET IMSLILKASN KGA
|
|---|
| |