Gene Cphy_1565 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCphy_1565 
Symbol 
ID5744387 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium phytofermentans ISDg 
KingdomBacteria 
Replicon accessionNC_010001 
Strand
Start bp1923808 
End bp1924149 
Gene Length342 bp 
Protein Length113 aa 
Translation table11 
GC content37% 
IMG OID641292667 
Producthydrogenase expression/synthesis HypA 
Protein accessionYP_001558678 
Protein GI160879710 
COG category[R] General function prediction only 
COG ID[COG0375] Zn finger protein HypA/HybF (possibly regulating hydrogenase expression) 
TIGRFAM ID[TIGR00100] hydrogenase nickel insertion protein HypA 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCATGAAC TAGGAGTAGT TATTGAAGTA GTGAAGACAG TGGAACGGGT TGCTCTGGAA 
CAGAATCTTA CAACAATAGA TACTGTAGTA TTACAAATTG GAGAGCTGTC ATCTATGATA
CCAAAATATG TAGAGCAATG TTATCCAGCA GCGATAGATG GAACTATCTT AGAGAACACG
AAACTTGAGA TTGAGATTTT ACCAGGAAAT GCGCTTTGTA AAGATTGTAA AAAGGTGTTT
CGGTTGTTAG AACATCATCA TCAATGCCCA ATATGCAATA CTAGAAACTG GGAGTTACTG
AGTGGTAGGG AGTTCTTTAT TAAAGAAATT GTAGCTTACT AG
 
Protein sequence
MHELGVVIEV VKTVERVALE QNLTTIDTVV LQIGELSSMI PKYVEQCYPA AIDGTILENT 
KLEIEILPGN ALCKDCKKVF RLLEHHHQCP ICNTRNWELL SGREFFIKEI VAY