Gene Cphy_1550 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCphy_1550 
Symbol 
ID5744372 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium phytofermentans ISDg 
KingdomBacteria 
Replicon accessionNC_010001 
Strand+ 
Start bp1904098 
End bp1904709 
Gene Length612 bp 
Protein Length203 aa 
Translation table11 
GC content31% 
IMG OID641292652 
Producthypothetical protein 
Protein accessionYP_001558663 
Protein GI160879695 
COG category[S] Function unknown 
COG ID[COG5578] Predicted integral membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.789003 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAATTAT TTCAAGTTGA CAGTCCATTG TATAAATTCT TACAGCGCTT ATTAGATGTG 
TTAATCTTAA ATTTCTGGCT GATTGTTTGC AGTATTCCGA TTATAACAGC AGGTGCATCT 
ATTACAGCAG CCTACAGTGT TGCATTAAAG ATGGCAAAAG AGGAAGAAGG GTATATTACA 
AAATCATTCT TTCAGGCATT CAAAGAAAAT TGGAAGCAAG GAACTGTTCT ATGGCTTATT 
ACTATGGTTT GTAGTTATAT CATATATCTT GATTTTGAAG TGTATTTCTC ATATGAAGAT 
GGGCCAGTAT TACTTTTAAT AACTGGAATT TTAGCTAGTA TTGCATTGTT TTGTTCTGTA 
ATTTATGCGT ATCCACAAGC AGCACGGTAT GAGAATACGA TTAAGCAATA TATTAAGAAT 
TCGAGGCAAA TTACAATCCG TTTTATCGGA AAAACATTAC TGTTAATAGT CATAGTTACG 
ATTGAACTAT TACTAGCTAT CTTTAACTCG GTTACTATAT TTTTTGCTAT TTTAATTGGC 
CCGGCTATTA TTATTTATAC GATTAGTGGA ATTTGTGTTA AAATATTTGA GGAAATTGAA 
TCAAATGAAT AA
 
Protein sequence
MQLFQVDSPL YKFLQRLLDV LILNFWLIVC SIPIITAGAS ITAAYSVALK MAKEEEGYIT 
KSFFQAFKEN WKQGTVLWLI TMVCSYIIYL DFEVYFSYED GPVLLLITGI LASIALFCSV 
IYAYPQAARY ENTIKQYIKN SRQITIRFIG KTLLLIVIVT IELLLAIFNS VTIFFAILIG 
PAIIIYTISG ICVKIFEEIE SNE