| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphy_1521 |
|---|
| Symbol | nagB |
|---|
| ID | 5744343 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium phytofermentans ISDg |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010001 |
|---|
| Strand | + |
|---|
| Start bp | 1871977 |
|---|
| End bp | 1872732 |
|---|
| Gene Length | 756 bp |
|---|
| Protein Length | 251 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 36% |
|---|
| IMG OID | 641292623 |
|---|
| Product | glucosamine-6-phosphate deaminase |
|---|
| Protein accession | YP_001558634 |
|---|
| Protein GI | 160879666 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0363] 6-phosphogluconolactonase/Glucosamine-6-phosphate isomerase/deaminase |
|---|
| TIGRFAM ID | [TIGR00502] glucosamine-6-phosphate isomerase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.00621711 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGTTCAAA AGCATTTTGA TAAGGTTGTC GTAAATATTT ATGATACAAG AGAAGAGATG
GGAGAAGCAG CTGCTAGAGA AGCTTCGGAG TGTATAAAAA AGTTATTGCA AGAGAAAGAC
GTAATCAACT GTATGTTTGC GGCAGCTCCA TCTCAGAATG AATTTTTAGT AGCTTTAGTA
AATGATAAAA ATATTCCGTG GCATCGAATC AATGCTTTCC ATATGGATGA ATATATGGGC
CTAGAAGAAG GGGATTCCCG CACATTTCGA GCATTCTTAA AAAAGGCAAT CTTCGATAAG
GTTCCTTTCA ACCAGATATT TTTAATCAAT GGTGAAAAAG AACCGGAAGA AGAATGCGAG
AGATTAGAGG CAATAATGAA AGAACATCCT TTGGATATTG TTTTCATGGG AATAGGAGAA
AATGGTCATA TTGCATTTAA TGATCCACCG GTAGCAGATT TTAAAGACCC TAAAAATATT
AAGATTGTTG AACTTGAAGA GAATTGTAGA AAGCAACAAG TAAATGATAA ATGTTTTGAG
AGTCTAGATG AAGTTCCTAA GAATGCGTTA ACAGTTTCGA TTCCGAAACT TATGCAGGCA
AATCACATCT TTTGTATCGT TCCTGGAATC TTAAAAGCAC AAGCAATTAA AGGTACTTTT
CTAGGGCCAA TCAATGAATC TTGCCCAGCT AGCATATTAA GGAGACATGA CAACGCACAT
GTTTATGTAG ATAAGGATAG TGCATCGAAG TTATAA
|
|---|
| Protein sequence | MVQKHFDKVV VNIYDTREEM GEAAAREASE CIKKLLQEKD VINCMFAAAP SQNEFLVALV
NDKNIPWHRI NAFHMDEYMG LEEGDSRTFR AFLKKAIFDK VPFNQIFLIN GEKEPEEECE
RLEAIMKEHP LDIVFMGIGE NGHIAFNDPP VADFKDPKNI KIVELEENCR KQQVNDKCFE
SLDEVPKNAL TVSIPKLMQA NHIFCIVPGI LKAQAIKGTF LGPINESCPA SILRRHDNAH
VYVDKDSASK L
|
|---|
| |