Gene Cphy_1520 details

Gene Information

• Locus tag: Cphy_1520
• ID: 5744342
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Clostridium phytofermentans ISDg
• Kingdom: Bacteria
• Replicon accession: NC_010001
• Strand: +
• Start bp: 1869750
• End bp: 1871774
• Gene Length: 2025 bp
• Protein Length: 674 aa
• Translation table: 11
• GC content: 33%
• IMG OID: 641292622
• Product: methyl-accepting chemotaxis sensory transducer
• Protein accession: YP_001558633
• Protein GI: 160879665
• COG category: [N] Cell motility; [T] Signal transduction mechanisms
• COG ID: [COG0840] Methyl-accepting chemotaxis protein

Plasmid Coverage information

• Num covering plasmid clones: 7
• Plasmid unclonability p-value: 0.0527458
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACCATTG GAAAAAAAGA AGTAAGAAAT ACTAAGGTAA AAAGAAGTAT AAAAACAAAA 
CTCATTCTAA TAATTGCTCC GCTTGTTGTC ATTGCAATTG GAACATTACT TATGATTACG 
TATACAAATT CAAGGAAAAT CATAATGGAT GATGCAAACC AACTGGTAAA GTCATTAACA 
AAATCAAATG CAAATGAGAT AGAAACTTGG TCACAAGAAA TAATTTCCTC ATTAAATCAA 
GTTCAGAATA CGCTTAATAA TGTTGAATTA GATACCAATG CTTTGATGAA GTACTTAAAA 
TCAACTATGA ATCAAAATGA TAGTTTTGCA GATGGTGTAT ATGTTGGAAC AGACAAGCAA 
GAACTGTTTA CTCCTTTTGA CTTTACAATG CCATCAGGTT TCATAGTTAC TGAGAGGGAT 
TGGTTTAAAG AAGGGTTGGA AAATGAACAT TTCCAATACG GAACAGCATA TCTAGATGCT 
CATACTGGAG AATATATTGT AAGTGCTTCT GCTAAACTTA AGTCAGCTAA TGGAGTGAAA 
AAAGTCGCTT CAGTAGACAT ATCTTTAAAA GAAATGTCGA AAATTATTAG TACGAAAAAG 
ATAATGGAAA CTGGCAGACT TTTTATCGTT GATATAACCA GTAGTAAGAT TCTCGCAATT 
AATGATGAAA CTCTAATCAA TACTGATTTT AATGTTAGTA ATAACGATAA ATTGATTGCA 
GAGATGGCAG CTAGGATAAA TTTAGATATT GATGAATTCA CTGAGCTAAC ATTAGATGGA 
AGTAAATATT CTGTTGATGT TCAATCGATT AAGAATACTC CTTGGAAGGT GATTGGATAC 
ATACCTCATT CCGAAATTTT AGAAACATTA AACAATCTTC AAATTTTTGT ATTTGTTCTA 
TTTCTAGGTT CTATGATTGT GTTAGTAGTC TTAGTAGAAC GAGTTATTCA CTATATCATA 
AAACCAGTAA AGAATTTAAA TACTTCTATT GAAAAAATAA CATCAGGCGA TTTCTCTGTT 
GATGTGAGCA TTAAGGGAAA TGATGAAATT GCAATGATGT GCAATAACAT GCAAAAATTT 
ATTGAAACAA TGCGAGGTAC AATTATAGAA GTTACCAGCA TGTCAAACAG TTTAGAAAAG 
CAGTCTGATA ACAGTACTAA AATCGCTCAA GTATTATACG ATTCCGCACA AACACAATCA 
AATGCGATGT TAGAATTAAA TCAAACGGTA GATGAGTTAG CTAGAGCTGT AACTGATGTT 
GCAGAAAATA CGACCTCTCT TTCTATGGTA GCTTCAGAAA CAGGCCAAAA AGGTAAAGAT 
GCAGGTGAAA AGATGAAAGA TACCGTTATG ATATCTGAAA AAGGTAAAGA AGATATGCTT 
CATATTGATA CTGCTATGAA GAGTGTTGAT TTCAATGTAT CTCAGCTAAA AGAAGCAGTG 
GAACAGGTAA TTGAATCCAG TGAAAAAATC AATGATATCG TTAAGTTGAT TGCTGATATT 
TCAAGTCAAA CGAATTTATT ATCATTAAAT GCAGCGATAG AGGCAGCAAG AGCTGGAGAA 
TCTGGAAGAG GATTTTCTGT TGTTGCAGAA GAAATTAGAA AGCTTGCTGA AACCAGTGAA 
AGTTCTGTGA GAAGTATAGC GGAATTAAAT CAAAACATAC AAAAGCTTGT AACCAATACT 
GTAGATAAGA CACAGGAAAG TACGGACAGT ATTAAAAACA GTATAAACTT AATTCAAGCT 
GCCAGTGATA CGTTTAATAA GATCTATGTA ACTATCAGTG AGACCAGTGA TATTGTCGAA 
GATATGATTG TAAATGTTAA CCGTGTAGAT GATGTGGCTA CTTCGGTAGC AGCCATAACG 
CAAGAACAAT CTGCTGCAGC AGAAGAAATA CTAGCAACTT CGGAAAACCT ATCAAGCCAT 
GCTGCGACAA TAACAGAACA TAGCTTTACG GTAGAACAGG ATGCATCAGT GCTTTCACAA 
ACTGCGGAAA ATCTTAATAA TCAAATGAAA TTCTTTAAGA TATAA 

 

Protein sequence

MTIGKKEVRN TKVKRSIKTK LILIIAPLVV IAIGTLLMIT YTNSRKIIMD DANQLVKSLT 
KSNANEIETW SQEIISSLNQ VQNTLNNVEL DTNALMKYLK STMNQNDSFA DGVYVGTDKQ 
ELFTPFDFTM PSGFIVTERD WFKEGLENEH FQYGTAYLDA HTGEYIVSAS AKLKSANGVK 
KVASVDISLK EMSKIISTKK IMETGRLFIV DITSSKILAI NDETLINTDF NVSNNDKLIA 
EMAARINLDI DEFTELTLDG SKYSVDVQSI KNTPWKVIGY IPHSEILETL NNLQIFVFVL 
FLGSMIVLVV LVERVIHYII KPVKNLNTSI EKITSGDFSV DVSIKGNDEI AMMCNNMQKF 
IETMRGTIIE VTSMSNSLEK QSDNSTKIAQ VLYDSAQTQS NAMLELNQTV DELARAVTDV 
AENTTSLSMV ASETGQKGKD AGEKMKDTVM ISEKGKEDML HIDTAMKSVD FNVSQLKEAV 
EQVIESSEKI NDIVKLIADI SSQTNLLSLN AAIEAARAGE SGRGFSVVAE EIRKLAETSE 
SSVRSIAELN QNIQKLVTNT VDKTQESTDS IKNSINLIQA ASDTFNKIYV TISETSDIVE 
DMIVNVNRVD DVATSVAAIT QEQSAAAEEI LATSENLSSH AATITEHSFT VEQDASVLSQ 
TAENLNNQMK FFKI