Gene Cphy_1300 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCphy_1300 
Symbol 
ID5744906 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium phytofermentans ISDg 
KingdomBacteria 
Replicon accessionNC_010001 
Strand
Start bp1626827 
End bp1627501 
Gene Length675 bp 
Protein Length224 aa 
Translation table11 
GC content36% 
IMG OID641292405 
Productcyclic nucleotide-binding protein 
Protein accessionYP_001558416 
Protein GI160879448 
COG category[T] Signal transduction mechanisms 
COG ID[COG0664] cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAGAGTA GTCCTTTGAA AAAAGAGCAT CTCAATAAAT TAGAAGGATA TGGCATAAAC 
AATATGCCCT TGGATGCATG CTTATGTCTG AGGTTTGAAG CTGGAGAAAA CATTTTACAT
GAAGGAATGC CAATTATGTA CCTTATGTTT GTTGTTACAG GGAAGGTTAA AATTTGTTCC
ACAGCGAAAA ATGGCAAAGA TTTAGTTTTA TGCTATTATA TTTCCGATGG CATTATAGGC
GATTTAGAAT TGATGACCAA TACCTATGAT GCAACAGCCA GTATTATAGC CATAACTGAT
TTTGAGTGTA TCGCATTGCC CTATCAAAAA TATGCTATAG ATTTAAAAAA TAATCTTGCC
TTTCTGAAGA GAATTGGGAG TGAACTTTCT AACAAGCTAT TGCGAATTTC AAAAAATTAT
GTATTTACTA CCTTGCATTC AGGAGAAGAA CGTCTATGCT CCTATATTTT ACAAGCATCA
CATAATGGTA TATTTAATGA TATACTGACG GATGTATCTT GTTCAATAGG TATGAGTTAT
AGGCATATGT TTCGCTTGTT GAACCAGCTC TGTACAGATG GGTTATTGGA CAAAAGAGAC
AATGGGTATA TCATTGTTGA CCGTGAAGAA TTGCTTCGAA GAGCGCCAGG GGGATACGAC
GGCATGATGT GTTGA
 
Protein sequence
MQSSPLKKEH LNKLEGYGIN NMPLDACLCL RFEAGENILH EGMPIMYLMF VVTGKVKICS 
TAKNGKDLVL CYYISDGIIG DLELMTNTYD ATASIIAITD FECIALPYQK YAIDLKNNLA
FLKRIGSELS NKLLRISKNY VFTTLHSGEE RLCSYILQAS HNGIFNDILT DVSCSIGMSY
RHMFRLLNQL CTDGLLDKRD NGYIIVDREE LLRRAPGGYD GMMC