Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cphy_1242 |
Symbol | |
ID | 5744848 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium phytofermentans ISDg |
Kingdom | Bacteria |
Replicon accession | NC_010001 |
Strand | + |
Start bp | 1567627 |
End bp | 1568622 |
Gene Length | 996 bp |
Protein Length | 331 aa |
Translation table | 11 |
GC content | 27% |
IMG OID | 641292348 |
Product | integral membrane sensor signal transduction histidine kinase |
Protein accession | YP_001558359 |
Protein GI | 160879391 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0642] Signal transduction histidine kinase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGTTTATTG CTAAATATTT TATTACAATT TTTATATGGT CTATGGTTTA TGTTATACTT TCGCAGTATT TATTATTTGA TATGTTTATT CTAATATATA TTGCTGGAGT CTTAATAATT TCTCTGTTTT TTATGTTTCT ACTTCATACG CAAAAGGAAA AACTTCGACA TAGCCTAAGT GATATTTTTG ATAAATCTTG GTATGATTAT AATTATTCAG AACAGGAAGC ATCTATTTTT GAATATAAGT TTTATCAATT TATACAATCC AATATTACTA TAACAAAAAG TATTCAAAAG GAAAAAGAGC AAATACATAG TTTAATAACC GACATCTCAC ATCAAATAAA AACTCCTTTG TCGAATATCA TTTTGTATGC GGATTTGTTA CAAGAAGAAT ATAATGATGA GCGCATAAAT AACATAAGTT CAGAAGGAGA AAAGTTAAAA TTCTTATTTG ATGCAATGAT AAAAATGTCA CGCTGTGAAA GTGGATTAAT TCTTGAAAAT TTACAGCGAA AAGAAAATTA TATAAAAGAA TTATTGACAA ATGCGGTATC TAGTATTTAT AAAGATGCAG AACAAAAGAA TTTAGACATA CAAATAGATT GTAATTCCAA TATTAAAGCT TTCTTCGATA TGAAATGGAC AACGGAAGCA ATCTCTAATA TTCTAGATAA TGCAGTTAAG TATTCATCAG TTGGCAGTAA TATAGAGATA ACGGTTAATG ATTATAATTT GTATATTGAA ATTGAAATCA CAGATCATGG AATAGGGATA GAAGAGCATG AACAACAAAA TATATGGAGA CGGTTCTATC GTAGTGATTC TGTAAAGGAA TTACAAGGAG TAGGTATCGG CCTTTATTTG ACGTCTAATA TTATATTAAA TCAAAAGGGT TATCTAAAAG TAAAAAGCAA ATTAGGTGAA GGAAGTACAT TCAGTGTTTT TTTAAGCAAA TTAAAAAGTG ATGAATGTAT TAGTTCTCCA ATATAA
|
Protein sequence | MFIAKYFITI FIWSMVYVIL SQYLLFDMFI LIYIAGVLII SLFFMFLLHT QKEKLRHSLS DIFDKSWYDY NYSEQEASIF EYKFYQFIQS NITITKSIQK EKEQIHSLIT DISHQIKTPL SNIILYADLL QEEYNDERIN NISSEGEKLK FLFDAMIKMS RCESGLILEN LQRKENYIKE LLTNAVSSIY KDAEQKNLDI QIDCNSNIKA FFDMKWTTEA ISNILDNAVK YSSVGSNIEI TVNDYNLYIE IEITDHGIGI EEHEQQNIWR RFYRSDSVKE LQGVGIGLYL TSNIILNQKG YLKVKSKLGE GSTFSVFLSK LKSDECISSP I
|
| |