Gene Cphy_1242 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCphy_1242 
Symbol 
ID5744848 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium phytofermentans ISDg 
KingdomBacteria 
Replicon accessionNC_010001 
Strand
Start bp1567627 
End bp1568622 
Gene Length996 bp 
Protein Length331 aa 
Translation table11 
GC content27% 
IMG OID641292348 
Productintegral membrane sensor signal transduction histidine kinase 
Protein accessionYP_001558359 
Protein GI160879391 
COG category[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTTATTG CTAAATATTT TATTACAATT TTTATATGGT CTATGGTTTA TGTTATACTT 
TCGCAGTATT TATTATTTGA TATGTTTATT CTAATATATA TTGCTGGAGT CTTAATAATT
TCTCTGTTTT TTATGTTTCT ACTTCATACG CAAAAGGAAA AACTTCGACA TAGCCTAAGT
GATATTTTTG ATAAATCTTG GTATGATTAT AATTATTCAG AACAGGAAGC ATCTATTTTT
GAATATAAGT TTTATCAATT TATACAATCC AATATTACTA TAACAAAAAG TATTCAAAAG
GAAAAAGAGC AAATACATAG TTTAATAACC GACATCTCAC ATCAAATAAA AACTCCTTTG
TCGAATATCA TTTTGTATGC GGATTTGTTA CAAGAAGAAT ATAATGATGA GCGCATAAAT
AACATAAGTT CAGAAGGAGA AAAGTTAAAA TTCTTATTTG ATGCAATGAT AAAAATGTCA
CGCTGTGAAA GTGGATTAAT TCTTGAAAAT TTACAGCGAA AAGAAAATTA TATAAAAGAA
TTATTGACAA ATGCGGTATC TAGTATTTAT AAAGATGCAG AACAAAAGAA TTTAGACATA
CAAATAGATT GTAATTCCAA TATTAAAGCT TTCTTCGATA TGAAATGGAC AACGGAAGCA
ATCTCTAATA TTCTAGATAA TGCAGTTAAG TATTCATCAG TTGGCAGTAA TATAGAGATA
ACGGTTAATG ATTATAATTT GTATATTGAA ATTGAAATCA CAGATCATGG AATAGGGATA
GAAGAGCATG AACAACAAAA TATATGGAGA CGGTTCTATC GTAGTGATTC TGTAAAGGAA
TTACAAGGAG TAGGTATCGG CCTTTATTTG ACGTCTAATA TTATATTAAA TCAAAAGGGT
TATCTAAAAG TAAAAAGCAA ATTAGGTGAA GGAAGTACAT TCAGTGTTTT TTTAAGCAAA
TTAAAAAGTG ATGAATGTAT TAGTTCTCCA ATATAA
 
Protein sequence
MFIAKYFITI FIWSMVYVIL SQYLLFDMFI LIYIAGVLII SLFFMFLLHT QKEKLRHSLS 
DIFDKSWYDY NYSEQEASIF EYKFYQFIQS NITITKSIQK EKEQIHSLIT DISHQIKTPL
SNIILYADLL QEEYNDERIN NISSEGEKLK FLFDAMIKMS RCESGLILEN LQRKENYIKE
LLTNAVSSIY KDAEQKNLDI QIDCNSNIKA FFDMKWTTEA ISNILDNAVK YSSVGSNIEI
TVNDYNLYIE IEITDHGIGI EEHEQQNIWR RFYRSDSVKE LQGVGIGLYL TSNIILNQKG
YLKVKSKLGE GSTFSVFLSK LKSDECISSP I