| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphy_1233 |
|---|
| Symbol | |
|---|
| ID | 5744838 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium phytofermentans ISDg |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010001 |
|---|
| Strand | + |
|---|
| Start bp | 1556433 |
|---|
| End bp | 1557260 |
|---|
| Gene Length | 828 bp |
|---|
| Protein Length | 275 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 35% |
|---|
| IMG OID | 641292338 |
|---|
| Product | NLPA lipoprotein |
|---|
| Protein accession | YP_001558350 |
|---|
| Protein GI | 160879382 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG1464] ABC-type metal ion transport system, periplasmic component/surface antigen |
|---|
| TIGRFAM ID | [TIGR00363] lipoprotein, YaeC family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGAAAAT TAAAAAAATT AGGTATTTTA GCGTTAGGAT TAACTTTAGC TTTTGCAGTA
ACAGGATGCG GAAAGAAGGA TGCAGCTAAG GATAACAAAG TAGTTAAGGT CGGTGTTGTT
GGTGAATCGA ATGAAATGTG GGTACCTGTC ATTGAAGAAC TTAAGAAAGA GGGAATTGAA
GTTCAATTAG TAACATTTAC AGATTATAAT ACTCCAAATG CTGCTTTAAA TGGGGGTGAA
GTTGATTTAA ATGCATTCCA GCATTATGCT TATCTTAATA AAGAGAAAGA CAACAATGGG
TATAAGATTG ATTCAATCGG TGATACATTT ATCTCCGCAA TGAATATCTA TTCCAAGAAG
ATTGATAATT TAAGTGGGAT AAAAGAAGGG GATAAGGTTG CAGTTCCTAA TGATGCTACT
AACGAAGGTA GAGCATTAAA GGTTCTTGAA GCAGCGGCGC TTATCGAATT AAACAAAGCT
GCAGGTGACA GCCCGGAAGT GAAGGATATA ACTGCAAATC CTTTCAATCT TGAGTTAGTA
GAAGTAGATG CAGCAAATGT TTATGCTTTA CTTCCAGATG TAACGATTGC AGTAATTAAT
TGTAATTATG CTTTAGACAA TGGTTTAAAT CCGGGAAAAG ATTCATTATT CCAAGATAGT
GTAAGTATCT ATGCAGGGAA GAATTATGTA AACCTGATTG CAGCAAGAAC TGAAGATTTA
GATAATGAAG TGTATAAAAA GATTGTAAAA GCATATCAAT CCGACGCAGT AAAAGATGTT
TATGCAGATA CCTTTAAGGG ATCTTATCTA GCTGCATGGG AGGAGTAA
|
|---|
| Protein sequence | MRKLKKLGIL ALGLTLAFAV TGCGKKDAAK DNKVVKVGVV GESNEMWVPV IEELKKEGIE
VQLVTFTDYN TPNAALNGGE VDLNAFQHYA YLNKEKDNNG YKIDSIGDTF ISAMNIYSKK
IDNLSGIKEG DKVAVPNDAT NEGRALKVLE AAALIELNKA AGDSPEVKDI TANPFNLELV
EVDAANVYAL LPDVTIAVIN CNYALDNGLN PGKDSLFQDS VSIYAGKNYV NLIAARTEDL
DNEVYKKIVK AYQSDAVKDV YADTFKGSYL AAWEE
|
|---|
| |