| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphy_1100 |
|---|
| Symbol | |
|---|
| ID | 5741935 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium phytofermentans ISDg |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010001 |
|---|
| Strand | + |
|---|
| Start bp | 1389516 |
|---|
| End bp | 1390538 |
|---|
| Gene Length | 1023 bp |
|---|
| Protein Length | 340 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 37% |
|---|
| IMG OID | 641292205 |
|---|
| Product | peptidase M42 family protein |
|---|
| Protein accession | YP_001558217 |
|---|
| Protein GI | 160879249 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG1363] Cellulase M and related proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGAAACGA AAGAGTACAT TATTAAAACG TTAGAAACAT TAGTGAACAT TCCAAGCCCA
TCTGGGTTTA CGAAAGAAGT GATGGAGTTT GTTGAAAGAG AAGCTAATAA GTATCATTAT
TCCTGTGAGT ATATCAAACG AGGTGGCCTA ATTATTACAG TTCCTGGAGA AAGTAATGAT
TGCCTTGGTC TATCAGCTCA TGTAGATACA CTGGGTGCTA TGGTCCGTTC CATCGGTGGT
GATGGTATAA TTCGCTTCAC CTGTGTTGGG GGCTACACAA TGAATAGTAT CGAAGGTGAA
TATTGCAAAA TCCATACCAG AGAAGGAAAG GTGTATACCG GAACTATTCT TTCAAAAAGC
CCATCGGTTC ATTCCTATGA TGATGCAAGA ACTCTTGAAC GCAAGGATCG AAACATGGAA
ATCCGTATTG ATGAGAAAGT AGAGAATAAA GAAGATGTTT TAAACCTTGG AATCAATAAT
GGAGATTATA TTAGCTTTGA TGCACGTTTT GAGTATACAA AAAGCGGTTT TATCAAATCC
AGACATCTGG ATGATAAGGC AAGTGTAGCT GTTTTATTAG GTTTACTGAA AGATTTGTCT
GAACAAAATG TTACACCAAA GAGAACTTTA AAGATTTTAA TCAGCAACTT AGAAGAAATC
GGTATGGGCG CTTCCTATAT CCCATCTGAA ATTAGTGAAT TTATTGCTGT TGACATGGGA
GCCATTGGTG ATGATTTAGC TGGTAATGAG TATTCCGTAT CAATTTGTGC ATTAGATTCT
TCAGGTCCAT ATGATTATGA GTTAACAACA AAACTTATGA ATCTTGCAAA AGACAAGCAA
ATCCCATATG TTGTAGACAT CTTCCCTCAT TATGGTTCTG ATGCATCTGC TGCTATGCGT
GGTGGCAATA ATATTAGAGC AGCGTTAATT GGACAGGGAA TCCACGCTTC TCATGGGATG
GAGCGTACTC ATGAAACAGC ATTAATTGCT ACTTTAGATT TATTAAAAGT ATATGTAGGA
TAA
|
|---|
| Protein sequence | METKEYIIKT LETLVNIPSP SGFTKEVMEF VEREANKYHY SCEYIKRGGL IITVPGESND
CLGLSAHVDT LGAMVRSIGG DGIIRFTCVG GYTMNSIEGE YCKIHTREGK VYTGTILSKS
PSVHSYDDAR TLERKDRNME IRIDEKVENK EDVLNLGINN GDYISFDARF EYTKSGFIKS
RHLDDKASVA VLLGLLKDLS EQNVTPKRTL KILISNLEEI GMGASYIPSE ISEFIAVDMG
AIGDDLAGNE YSVSICALDS SGPYDYELTT KLMNLAKDKQ IPYVVDIFPH YGSDASAAMR
GGNNIRAALI GQGIHASHGM ERTHETALIA TLDLLKVYVG
|
|---|
| |