Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cphy_0895 |
Symbol | |
ID | 5741767 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium phytofermentans ISDg |
Kingdom | Bacteria |
Replicon accession | NC_010001 |
Strand | - |
Start bp | 1146011 |
End bp | 1146823 |
Gene Length | 813 bp |
Protein Length | 270 aa |
Translation table | 11 |
GC content | 33% |
IMG OID | 641292007 |
Product | ornithine carbamoyltransferase |
Protein accession | YP_001558019 |
Protein GI | 160879051 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1177] ABC-type spermidine/putrescine transport system, permease component II |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGTAAAAA AAATAAGTCA AAAAGTATAT GTTGCCCTCA TTATGTTTTT CTTGTATGCA CCAATTATGG TACTTATTGT CCTATCATTT AATAAATCCA AATCCCGTAG TAAATGGGGT GGATTTACCT TTGATTGGTA TAAGTCCTTA TTTCAAAATG AAGAGATCAT GAATGCACTG TATACTACAT TAATCATTGC ATTTTTATCT GCTTTAATTG CTACTATAAT TGGTACAGCA GCTGCCATTG GTATGAACCA TATGCGTAAG GTACCAAAAA CTATCATGAT GGGTATCACA AATATACCAA TGTTGAATGC AGATATTGTA ACTGGTATCT CATTAATGCT TCTTTTTATT GCAGTTAATT TCACACTTGG GTTTAAAAGT GTATTAATTG CACATATTAC ATTTAACATT CCTTATGTAA TATTAAGTGT AATGCCTAAG CTAAAACAAA CAAATCGAAA TACTTATGAA GCCGCACTAG ACCTTGGAGC TTCTCCTTTA TCAGCATTTT TTATGGTTGT ATTGCCTGAT ATTCTTCCAG GTGTTTTTTC CGGATTCCTA TTAGCTTTTA CTATGTCATT AGATGACTTT ATTATTACAC ACTTTACAAG AGGTGCGGCT GTCAATACTC TCTCCACTAA GATTTATGCT GAGACGAGAA AGGGTATTAA GCCTGAGATG TATGCTCTAT CTACTCTTCT CTTCCTCTCT GTCTTATTAC TACTTATCAT CATCAATCGT AGAAATGATA GAATAGAGAA GAAGCGCAAT GCAGTAACTC TTGCACCTGC AAAAAAACTC TAA
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Protein sequence | MVKKISQKVY VALIMFFLYA PIMVLIVLSF NKSKSRSKWG GFTFDWYKSL FQNEEIMNAL YTTLIIAFLS ALIATIIGTA AAIGMNHMRK VPKTIMMGIT NIPMLNADIV TGISLMLLFI AVNFTLGFKS VLIAHITFNI PYVILSVMPK LKQTNRNTYE AALDLGASPL SAFFMVVLPD ILPGVFSGFL LAFTMSLDDF IITHFTRGAA VNTLSTKIYA ETRKGIKPEM YALSTLLFLS VLLLLIIINR RNDRIEKKRN AVTLAPAKKL
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