Gene Cphy_0895 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCphy_0895 
Symbol 
ID5741767 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium phytofermentans ISDg 
KingdomBacteria 
Replicon accessionNC_010001 
Strand
Start bp1146011 
End bp1146823 
Gene Length813 bp 
Protein Length270 aa 
Translation table11 
GC content33% 
IMG OID641292007 
Productornithine carbamoyltransferase 
Protein accessionYP_001558019 
Protein GI160879051 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1177] ABC-type spermidine/putrescine transport system, permease component II 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTAAAAA AAATAAGTCA AAAAGTATAT GTTGCCCTCA TTATGTTTTT CTTGTATGCA 
CCAATTATGG TACTTATTGT CCTATCATTT AATAAATCCA AATCCCGTAG TAAATGGGGT
GGATTTACCT TTGATTGGTA TAAGTCCTTA TTTCAAAATG AAGAGATCAT GAATGCACTG
TATACTACAT TAATCATTGC ATTTTTATCT GCTTTAATTG CTACTATAAT TGGTACAGCA
GCTGCCATTG GTATGAACCA TATGCGTAAG GTACCAAAAA CTATCATGAT GGGTATCACA
AATATACCAA TGTTGAATGC AGATATTGTA ACTGGTATCT CATTAATGCT TCTTTTTATT
GCAGTTAATT TCACACTTGG GTTTAAAAGT GTATTAATTG CACATATTAC ATTTAACATT
CCTTATGTAA TATTAAGTGT AATGCCTAAG CTAAAACAAA CAAATCGAAA TACTTATGAA
GCCGCACTAG ACCTTGGAGC TTCTCCTTTA TCAGCATTTT TTATGGTTGT ATTGCCTGAT
ATTCTTCCAG GTGTTTTTTC CGGATTCCTA TTAGCTTTTA CTATGTCATT AGATGACTTT
ATTATTACAC ACTTTACAAG AGGTGCGGCT GTCAATACTC TCTCCACTAA GATTTATGCT
GAGACGAGAA AGGGTATTAA GCCTGAGATG TATGCTCTAT CTACTCTTCT CTTCCTCTCT
GTCTTATTAC TACTTATCAT CATCAATCGT AGAAATGATA GAATAGAGAA GAAGCGCAAT
GCAGTAACTC TTGCACCTGC AAAAAAACTC TAA
 
Protein sequence
MVKKISQKVY VALIMFFLYA PIMVLIVLSF NKSKSRSKWG GFTFDWYKSL FQNEEIMNAL 
YTTLIIAFLS ALIATIIGTA AAIGMNHMRK VPKTIMMGIT NIPMLNADIV TGISLMLLFI
AVNFTLGFKS VLIAHITFNI PYVILSVMPK LKQTNRNTYE AALDLGASPL SAFFMVVLPD
ILPGVFSGFL LAFTMSLDDF IITHFTRGAA VNTLSTKIYA ETRKGIKPEM YALSTLLFLS
VLLLLIIINR RNDRIEKKRN AVTLAPAKKL