Gene Cphy_0545 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCphy_0545 
Symbol 
ID5743459 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium phytofermentans ISDg 
KingdomBacteria 
Replicon accessionNC_010001 
Strand
Start bp699850 
End bp701943 
Gene Length2094 bp 
Protein Length697 aa 
Translation table11 
GC content35% 
IMG OID641291657 
Product4Fe-4S ferredoxin iron-sulfur binding domain-containing protein 
Protein accessionYP_001557671 
Protein GI160878703 
COG category[C] Energy production and conversion 
COG ID[COG1035] Coenzyme F420-reducing hydrogenase, beta subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGATTG GAATCATCGG CTATGCGAAA CCAGAGCTGG AAAGTCTTTT GCAAGCATAT 
GCAGTGAAAA AAGTATTAGA GGATGAGGCT GTAGATTGCT ATTGGTATCG TAAGAGGGAC
AATTTCACTT ACAAAGCCGC TAGAACCACT CACAAAAGGA ACTTACTTGA CGCTTTAAGC
GGGCGCCAAC ATATCCATGT CGACTTAAAT GAAGCAAAGA CCGCCATGGA AGGGTTTGTT
AAAGATAAAT TATCTTTGAA TCCAAATAAA TCGGAAAAAA CAGATAGCTT TGTAATTGTT
AATTATAAAT CTACCATTGA TACAACAAAT TCTACTGCGA ATTACATAGA CTTTTATCAA
AGAAGTTTCG AACCAAAGTC TGAGATTACA GAGGCATTGA TGCTTTGTAG CTTGGAAGAT
TATGAGAAAA TCATGGGAGA GACAATAGAT GAACAGGCCT ATGTTTTTAT GGATAGCGAA
ACTGACAAAG CTGGCATTAT TCCCTCCGTA CGAAAGATTG CAAAGGCAAA TAATCTAAAG
GTAATCTCGA AAGCTTATAA TCGCACCTAT TATGCATTTG AAAAGGTTAC AGAAATATTT
ACTCCATCGG AATATTTGGC ATATATTCGT GATGCAAAAT TAGTAGTTAC CGATTCTTTT
ACAACGGTAT ATTTTGCAAT CTTAATGAAA AAGCCATTAA TTTGTTACGA TCAAGGAATG
ACACAAGGAA AAATCAAACG ATTTTTACAA AGACTATCCT TGATGGATAA TTATTTTACG
ATGAAACAAT CGAACACTTC CTTAACAGCA TATAGCATAA AACATCCTAA CAAAGTTAAC
AAACAGCTAA AGAAGTATCG TGAAGAGTTG ACAGATTCTC TATATGAATT GGTAGGGGCT
TTTGGCATCG ATCAGCCAGT TAACTGCCCG ACTAAAATAA CTCGTGGTGA GTGTTGCGGT
TGTTATGCAT GTAAAGAGGT ATGTCCTACC GGTGCTATTC AAATGTTAAT GGATAGGGAA
GGATTTTATT ACCCACATGT GAATAAGGAA AAGTGTATCC ATTGTGGGCT TTGTGAAAGA
GTATGTGTGA AAAAAGAGAA TTCTCAGATT GTTTCTTATG AAGCAGATTA TCCAAAGGTT
TATAGTGCAA TTAATAAGGA TGAGAATGCT AGAATGATTA GTACCTCAGG AGGAGTCTTC
CATGCACTAT CAAAATACGC AATTGAACAG CGCGAAGGTG TAGTATTTGG GGTAAAATTT
GATGAGAATA TGAATGCAGT TTCAACCTTA GCTAGCACAA TGAATGATGT AAAAGCATTC
TATGGATCAA AGTATGTTAA GAGTGAGATT GATGGTGTAT ATGCAAAGGT AAAAGAACAG
TTAAATGAGG GTAAGTTTGT CTTATATTCA GGGTTACCAT GTGAATGTGC TGGCTTAAAG
GCATATCTAC GAAAAGATTA TGAGAATCTA TTCATTAGCG AAATTTTATG CCATGCAGCT
CCTTCACCAA AGGTATTTAA AAATTATCTA AAGTTCCTCT CTATAAAATA TAAGTCACCG
ATAACCAATG TGGTATTCCG TGATAAGAGG GATGGATGGT TAATTCATAA GTGTAGTATG
GTGATAGAAT TTAAAGATCG TAAGCCACTG GTTGTGAATG CAAGAAGAAA TAATTATTTT
AGAAACTTTT TATTAGATAA TATTCAGCGT CCAGGATGTT CACAGTGTAG TTTTGTTGGT
AGAAGTCGTG TAGGCGACAT TACCATCGGA GATTTCTGGG GAATACATCG TATGGATGAA
GAAATGTTTG ACGATAAAGG AACTAGTGCT ATTATGGTAA ATACAGAGAA AGGTGCGAAG
GTTCTTGAAG AGTTAAAAGA TTCTTTCTAT ATGAAGGAAA AAAGTATAAA AGAACTATTC
AAATATAACC ATAGCAAGCC TTGTCCATAT AAGCCAGAAC GTGATGAGAT TTTCAAACGT
TTAGGAAAAG AAAAAATAAA CCCATTATTA GAAAGTTTCA ATGATTTAAA AAATAAATCA
GCTAGAGATA TAACGGCAAA AGAAGTAGTA AATGAAGTAA TAATGGACGA TTAA
 
Protein sequence
MKIGIIGYAK PELESLLQAY AVKKVLEDEA VDCYWYRKRD NFTYKAARTT HKRNLLDALS 
GRQHIHVDLN EAKTAMEGFV KDKLSLNPNK SEKTDSFVIV NYKSTIDTTN STANYIDFYQ
RSFEPKSEIT EALMLCSLED YEKIMGETID EQAYVFMDSE TDKAGIIPSV RKIAKANNLK
VISKAYNRTY YAFEKVTEIF TPSEYLAYIR DAKLVVTDSF TTVYFAILMK KPLICYDQGM
TQGKIKRFLQ RLSLMDNYFT MKQSNTSLTA YSIKHPNKVN KQLKKYREEL TDSLYELVGA
FGIDQPVNCP TKITRGECCG CYACKEVCPT GAIQMLMDRE GFYYPHVNKE KCIHCGLCER
VCVKKENSQI VSYEADYPKV YSAINKDENA RMISTSGGVF HALSKYAIEQ REGVVFGVKF
DENMNAVSTL ASTMNDVKAF YGSKYVKSEI DGVYAKVKEQ LNEGKFVLYS GLPCECAGLK
AYLRKDYENL FISEILCHAA PSPKVFKNYL KFLSIKYKSP ITNVVFRDKR DGWLIHKCSM
VIEFKDRKPL VVNARRNNYF RNFLLDNIQR PGCSQCSFVG RSRVGDITIG DFWGIHRMDE
EMFDDKGTSA IMVNTEKGAK VLEELKDSFY MKEKSIKELF KYNHSKPCPY KPERDEIFKR
LGKEKINPLL ESFNDLKNKS ARDITAKEVV NEVIMDD