| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphy_0295 |
|---|
| Symbol | |
|---|
| ID | 5744218 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium phytofermentans ISDg |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010001 |
|---|
| Strand | - |
|---|
| Start bp | 366857 |
|---|
| End bp | 369103 |
|---|
| Gene Length | 2247 bp |
|---|
| Protein Length | 748 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 36% |
|---|
| IMG OID | 641291385 |
|---|
| Product | DNA topoisomerase (ATP-hydrolyzing) |
|---|
| Protein accession | YP_001557421 |
|---|
| Protein GI | 160878453 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0188] Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAAAG AAGCAGAAAA TATAATACAG TTGGATTTTT CTGAAGAAAT GAAAACCTCA
TTTCGTAACT ATGCGATGAG TGTTATCATG GCTAGAGCCA TACCAGATGT ACGTGATGGT
TTAAAACCTG TTCAACGAAG AATCCTTTAT TCCATGATAG AGCTAGGACT TGATCCAAAG
AAGCCACACA GAAAGAGTGC CCGTATTGTT GGCGATACGA TGGGTAAATA TCACCCTCAT
GGTGACAGCT CCATATACGA TGCACTCGTT CATATGACAG AGCCTTATTC AATGCAAATC
CCTCTTGTCG ATGGTCACGG TAACTTTGGT TCCATTGACG GTGATGGTGC AGCCGCGATG
CGTTACACGG AAGCACGTTT ATCCGATGGC GCGATGACTT TACTTGATCA TCTTGATAAG
GGACTTGTTG AATTTGTACC TAACTTTGAT GAAAGTGAGA AAGAACCCTC TGTCTTACCA
GCGATGCTTC CAAATTTATT AATTAATGGA ACTACTGGTA TTGCAGTTGG TATGGCAACC
AATATGCCAC CGCATAATCC AAGTGAGGTT ATCGAAGGTG TCATAGCGTA TATTGACAAT
CCCGATATTA CTACCGAAGG GTTAATGAAA TATATACCAG GGCCAGATTT CCCGACTGGT
GGAACAATTA TTAATAGCGA AGATATTAGG AATATTTATG AAACTGGTGA AGGTCGTCTC
AAGGTTCGTG CAAAGACTGA AATCGAGGCT TCTGACAATG GTAGAAAAAA CATTGTAATT
ACAGAAATTC CATATACCGT AGCAGGAAAT AAGACCAAAT TAGTCGAAAG CCTTGTAGAT
TTGATGAAAG ATAAAGTCTT TGATGAGATT TTTGACGTTC GTGACGAGTC CTCAAAAGAA
GGTATTCGTG TCGTAATTGA AGTAAAGAAG GACCGTGACA TCGAAAACCT ATTAAATGGT
CTTTATAAAA AAACCTCTAT GGAAGACACG TATGGAGTAA ACCTTCTAGC AGTAAAAGAT
CAACAGCCAA TTGTATTCAA GCTAAAGAAT TTGGTTGGTG AGTTTGTTTC TTTTCAAGAA
GAACTCTATA CGAAAGAATA CGAACACTTA TTAGATAAAG CAAATAAACG ATTAGAAATC
GTTGATGGTT TAATCCGAGC AACGGATGTA ATTGATTTAA TTATCGAAAT TCTACGTGGC
TCCTCTTCCA TTAAACAAGC AAAGGATTGT TTGATTCATG GAAATACCAC AGAAATTAAT
TTTAAAACAG AGGCTTCTAG AAAAAAAGCA GCAAAACTCG ATTTTACAGA ACGACAGGCG
GATGCTATTC TTGCAATGCC TTTAAGTAAA TTAATCGGTT TAGAAATACT TAGACTACAT
GAAGAGAATC AAAGTTTGTT GGATAGTATC GAACAATATC AGAGTATTTT AGGAAACAAA
AAAGAGCTCT TTAAAGTCAT TAAAAGTAAC TTAAAAGAAT ACAAAAAGCA ATTTAACGTT
CCAAGACATA CTGTTCTCGC TAATATGGAA ATTGCAGAAT ACGTAGAAGA GGTCAAAGTA
GAAGATATTT ATATCTTAAT TGACAAATTC GGCTATACAA AATCCGTCGA TAATACTAGT
ATTTCTCGTG TTTCCGAGGA CAATTTAAAA GACTTTGTTC ATATCGTTAA AATGAAGAAT
ACCGACCGAT TATGCCTTTT TACAGCACAA GGTAACATGT ATCAAGTAAA GGCGGAAAAG
ATACCAAAAT GTAAAATAAA AGACAAAGGT ACCCTAATTC ATAATTTATG TAAGGTAGAT
AAAGAAGAAA TTCTGCTTTA TATTGCATTT GAAGATTTAT TTGAATCACA ATTACTGTTC
ACAACAAAAA ACGGTTTTAT AAAATTAGTA TCCGGAATCG AATTTGAAAC TAATCGTGCA
ATGATATCTG CAACAAAGCT AGAGGAAGCC GATCATGTGG TATCTGTTCT TTGCTTAAGT
GCCCATACCA TTTCAAATCC AGATTCCAAA GTTATTCTGT TAACAGAAGA CAGTCTTTCA
CTTGGCTTCC CATTAACTGA GGTATCCGAG TTAAAGAAGA CCAGTAAGGG AGTGAAAGGT
ATCACCCTGG AGAAAAAGGA CAAAGTCGCC TTTGCTACAG TTGCCCTTCC TGAAACAGAA
TTCTTTGAAT ATCAAGGAAA AGAACTCTCT GCTAAGAAAG TCCGTAATAG AAAGCGTGCA
GCTAAGGGGC AAAAGGCTAG TTTATAA
|
|---|
| Protein sequence | MKKEAENIIQ LDFSEEMKTS FRNYAMSVIM ARAIPDVRDG LKPVQRRILY SMIELGLDPK
KPHRKSARIV GDTMGKYHPH GDSSIYDALV HMTEPYSMQI PLVDGHGNFG SIDGDGAAAM
RYTEARLSDG AMTLLDHLDK GLVEFVPNFD ESEKEPSVLP AMLPNLLING TTGIAVGMAT
NMPPHNPSEV IEGVIAYIDN PDITTEGLMK YIPGPDFPTG GTIINSEDIR NIYETGEGRL
KVRAKTEIEA SDNGRKNIVI TEIPYTVAGN KTKLVESLVD LMKDKVFDEI FDVRDESSKE
GIRVVIEVKK DRDIENLLNG LYKKTSMEDT YGVNLLAVKD QQPIVFKLKN LVGEFVSFQE
ELYTKEYEHL LDKANKRLEI VDGLIRATDV IDLIIEILRG SSSIKQAKDC LIHGNTTEIN
FKTEASRKKA AKLDFTERQA DAILAMPLSK LIGLEILRLH EENQSLLDSI EQYQSILGNK
KELFKVIKSN LKEYKKQFNV PRHTVLANME IAEYVEEVKV EDIYILIDKF GYTKSVDNTS
ISRVSEDNLK DFVHIVKMKN TDRLCLFTAQ GNMYQVKAEK IPKCKIKDKG TLIHNLCKVD
KEEILLYIAF EDLFESQLLF TTKNGFIKLV SGIEFETNRA MISATKLEEA DHVVSVLCLS
AHTISNPDSK VILLTEDSLS LGFPLTEVSE LKKTSKGVKG ITLEKKDKVA FATVALPETE
FFEYQGKELS AKKVRNRKRA AKGQKASL
|
|---|
| |