Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cphy_0276 |
Symbol | |
ID | 5744199 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium phytofermentans ISDg |
Kingdom | Bacteria |
Replicon accession | NC_010001 |
Strand | - |
Start bp | 344532 |
End bp | 345398 |
Gene Length | 867 bp |
Protein Length | 288 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | 641291366 |
Product | MerR family transcriptional regulator |
Protein accession | YP_001557402 |
Protein GI | 160878434 |
COG category | [K] Transcription |
COG ID | [COG0789] Predicted transcriptional regulators |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.000161709 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAACAG TAAAACAAGT AGCTGAGTTA ACCGGAATCA GCGTAAGAAC CTTGCAGTAT TACGATGAAA TTGATTTATT CAAACCAAGC GAAGTTACGG ACGCTGGTTA CCGATTATAT GATGATGTGT CACTTGAAAC TCTGCAACAG ATTCTATTTT TTAAAGAACT GGACTTTCCA TTAAAGGATA TCAAACAAAT CATGGAGAAT CCACAATATG ATAAATTTAC TGCTTATAAG AAGCAAAAAG AACTAATCCG TGCCAAGAGA GATCGTCTTG ACCGGTTACT AAATCTATTG GAAAAGCTAG AAAGAGGAGA ACAATGTATG AGTTTTAAGG AATTCGATAT GAGTGATTAT TTTCACGCAT TACAGCAGTT TAAATCAGAT CACACAGATG AAGTAGTGAA ACACTGGGGC AGTATAGAAG CTTTTGACTC GATGTTAGAG AATTTTAAAG ATAAGGAAAG CGAGATTGCC AAATTAGCAA TACAACAATA TGGGAGCATT GAAAAATATA CGGAGGCTAT GAAAGCTAAT CTTAAGAACT TTCCTGAAAC AATGGAAAAA CTGCAGAGTT TAGGCAAGGA TAAAGACGAT TATCTCACTA GATCAAAAGA GATAAATGAA AAGCTTACAA AAGACTTAAC ACTGGATGTT GCTTCAAATG AGGTTCAGGA ATTAGTGAAA GAAATGGTTT TATTGAGTAA TGAGGTTAAT AAGGGATTTG ATATGGGCGA GAACTTTTGG GATATGGTCA TTGAGGGATA TCTTCATAGT GAACAACTAA TCAAGGCGAA TGATAGCTTA TATGGAGAAG GGGCTTCTGC GTTTATTGGT AGGGCTTTGG AGGAGTACTT TAAGTGA
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Protein sequence | MKTVKQVAEL TGISVRTLQY YDEIDLFKPS EVTDAGYRLY DDVSLETLQQ ILFFKELDFP LKDIKQIMEN PQYDKFTAYK KQKELIRAKR DRLDRLLNLL EKLERGEQCM SFKEFDMSDY FHALQQFKSD HTDEVVKHWG SIEAFDSMLE NFKDKESEIA KLAIQQYGSI EKYTEAMKAN LKNFPETMEK LQSLGKDKDD YLTRSKEINE KLTKDLTLDV ASNEVQELVK EMVLLSNEVN KGFDMGENFW DMVIEGYLHS EQLIKANDSL YGEGASAFIG RALEEYFK
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