Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cphy_0173 |
Symbol | |
ID | 5745041 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium phytofermentans ISDg |
Kingdom | Bacteria |
Replicon accession | NC_010001 |
Strand | + |
Start bp | 218439 |
End bp | 219458 |
Gene Length | 1020 bp |
Protein Length | 339 aa |
Translation table | 11 |
GC content | 32% |
IMG OID | 641291263 |
Product | diguanylate cyclase |
Protein accession | YP_001557299 |
Protein GI | 160878331 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2199] FOG: GGDEF domain |
TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 36 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAAACAAA AACATAATGG AGTAAGACGT ATTCATCAAG ATAACATGAG GGAAAACAAT CAGTCGAGAA CTTCCATTCT TTTCGCTATT GCTCTATTGA TTTATATTGT TCTTAGTATT TATCAATTAC AAATTAGGAA TCAGTTAGTC AAACAGATAC TGTTACATTT CCAGGTTATT CTTACAGTTT CATTTGTGAT TAGTGAGATA AAGCATAGTT ACTTGATTTC TATTCTGGTA ACTCTTTTTT GCTTTCTTTT GTCTTTTCTA TCGTTCTTTA CAGATGAGAA TGAGCAAGCG ATTCATGCAA TGATAATATA TGGGACTACG ATAGTGATAA TAAGTTTAAT ACACAAATAT AGAGTAAAGC TTACAGGTAA TCTGGAACAT GCTATTAGAC ATAATAAAAA ATCTGATGAA TTGATTAAAG AATTACGAAA GAAGAACAAA CAGCTGTCAA AGTTAAACAA GGATATGAGA GAAAAAGAGA AGCAATTAAA TCAGTTGGCA TTTTACGATA TTTTGACGAA GGTTGCAAAT CGGAAAATGC TAATTAATCA AATGGATTTC TTAATCAGCA TATCAAAAAA CTTTTCAGTT GTATTTATTG ATCTCGATAA TTTTAAGAAA ATAAATGATA CGATGGGGCA TCAGGCGGGA GATTCCTTAT TAAAAGCAGT CACGTTACGA ATTGGTGATT ATATTCATCC CAAAGATATG TTTGGTCGAT TAGGTGGAGA TGAATTTGTA TTAATCGTAC AAAGGGAGTT AGGAAATGAG GAAATACTGT CCTATGTCGA AGGGTTAAGG CAACAACTTA TTAGACCTTT TAGAATAAAA AAGGCCGAAC TTACTATCAC TGCAAGTTTT GGTATTTCAG CTTTCCCAAA GGATGGTAGA ACATCTTCCG AGTTGCTAAA GTTTTCTGAT ATTGCTATGT ATCAGGTCAA AAGTATGGGG AAAAACGATG TCGAGTTTTT TACTATGAGT ATGAAAAGGA AGAAGATAAA AAAATTATAA
|
Protein sequence | MKQKHNGVRR IHQDNMRENN QSRTSILFAI ALLIYIVLSI YQLQIRNQLV KQILLHFQVI LTVSFVISEI KHSYLISILV TLFCFLLSFL SFFTDENEQA IHAMIIYGTT IVIISLIHKY RVKLTGNLEH AIRHNKKSDE LIKELRKKNK QLSKLNKDMR EKEKQLNQLA FYDILTKVAN RKMLINQMDF LISISKNFSV VFIDLDNFKK INDTMGHQAG DSLLKAVTLR IGDYIHPKDM FGRLGGDEFV LIVQRELGNE EILSYVEGLR QQLIRPFRIK KAELTITASF GISAFPKDGR TSSELLKFSD IAMYQVKSMG KNDVEFFTMS MKRKKIKKL
|
| |