| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphamn1_2541 |
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| Symbol | |
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| ID | 6376239 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chlorobium phaeobacteroides BS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010831 |
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| Strand | - |
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| Start bp | 2712365 |
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| End bp | 2713861 |
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| Gene Length | 1497 bp |
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| Protein Length | 498 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 642685019 |
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| Product | nuclease SbcCD, D subunit |
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| Protein accession | YP_001960916 |
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| Protein GI | 189501446 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0420] DNA repair exonuclease |
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| TIGRFAM ID | [TIGR00619] exonuclease SbcD |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCTGTCGA GTAAAGGTTA TGAAAACGAG GAGGATTTCA AGGCGTTAAA GAAATGGTAT
AGAGATTTCA TAATCAGATC AATTGGTCTC ACAACAATGA AAATCCTTCA CACATCAGAC
TGGCATTTAG GCCGCTCCCT TTACGGCAGA AAACGGTATG AGGAGTTTTC GGCGTTTCTG
GACTGGCTGG TGGAGACTAT CGAGGATGAA GGGATCGACG TGCTTCTTGT TGCCGGTGAT
GTGTTCGACA GCAGCACGCC GGGCAATCGG GCTCAGGAGT TGTATTATCG CTTTCTTTGC
CGGGTGTCCA ACTCCTGCTG TCGCCATATC GTTGTCATTG CCGGGAACCA TGATTCTCCC
TCGTTTCTGA ATGCCCCGAA AGAGCTGCTG CGGGCGCTCA ATGTGCATGT GATCGGTGCC
GTAACGGACG CCCTGGAAGA CGAGGTTTTT GTGATTGATG ATTTTGGATC TGAGAAGTCA
GATTCAGGGC AAACATCGGG GCAATTGGAG TTTTTTCATT CAAAAATCAG CGATCAAAAA
TCTGCAATCA TCTGCGCTGT TCCCTATCTG CGCGACAAGG ACGTCCGGAC GGTGGAGCCG
GGAGAGACCA TCGACGACAA GAACCGCAAG CTGGTCGAAG GCATCAGGGA GCACTATGCC
CGGGTGGTCG AGATCGCCGA ACAAAAGCGC CACGCACTCC TCCGGCAACC GGCAGTCCGC
AGTCAAACTT CAAAAATCGA CACTCAAAAA TCCAAAATCC AAAATCACCA ATCCCCCATT
CCCATCATTG CCATGGGGCA CCTCTTCACC GCAGGGGGAA AAACCGTTGA AGGCGATGGC
GTCCGGGAGC TGTATGTGGG GTCATTGGCG CACGTCGGCA AGGAGGTATT CCCTCCGTCG
ATCGACTATG TCGCCCTCGG CCATCTGCAT GTTCCTCAGG CGGTTGGCGG CGCGGAACAC
ATCCGATATT CCGGCTCTCC CCTTCCCATG GGCTTCGGTG AAGCGAACCA GCAGAAATCC
ATGGTGATCG TAGAATTTGG ACTTGAGAAG GCAGTCAAAC TTCAAAAATC GCCACTCAAA
AATCAAAAAT CAAAAATCTC CCTCCTTCCC GTCCCCTGTT TTCAGCCGTT GGTCAGGATC
ACGGGTTCGC TGGAAGACAT TCAGGCAAGG CTGGAAGAGC TGAAAAAGGA CGAGAGCCGT
GCCTGGCTGG AGATCGAGTA TACAGGCCGT GAGATCATCG GTAATCTTCG GGAGAGTATT
GAGGAAACAC TCTCCGATTC ATCCATGGAA GTTCGTCGGA TAAAAAACAG GATGGTTATG
GACCGGGTGA TCGGCTCGAT CGAAGAAGAA GAGGCCCTCG ACGACCTCGA TGCGCAGGAA
GTTTTTACCC GCTGCCTCGA CGCATTCGAC GTGCCTCACG AAGATCGGGA GGAACTGAAT
GGCGCGTATA ACGAGGTGGT GAGAGATGTG CTTGAGGAGG ATCGGGATGC AGAATAG
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| Protein sequence | MLSSKGYENE EDFKALKKWY RDFIIRSIGL TTMKILHTSD WHLGRSLYGR KRYEEFSAFL
DWLVETIEDE GIDVLLVAGD VFDSSTPGNR AQELYYRFLC RVSNSCCRHI VVIAGNHDSP
SFLNAPKELL RALNVHVIGA VTDALEDEVF VIDDFGSEKS DSGQTSGQLE FFHSKISDQK
SAIICAVPYL RDKDVRTVEP GETIDDKNRK LVEGIREHYA RVVEIAEQKR HALLRQPAVR
SQTSKIDTQK SKIQNHQSPI PIIAMGHLFT AGGKTVEGDG VRELYVGSLA HVGKEVFPPS
IDYVALGHLH VPQAVGGAEH IRYSGSPLPM GFGEANQQKS MVIVEFGLEK AVKLQKSPLK
NQKSKISLLP VPCFQPLVRI TGSLEDIQAR LEELKKDESR AWLEIEYTGR EIIGNLRESI
EETLSDSSME VRRIKNRMVM DRVIGSIEEE EALDDLDAQE VFTRCLDAFD VPHEDREELN
GAYNEVVRDV LEEDRDAE
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