| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphamn1_2526 |
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| Symbol | |
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| ID | 6376224 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chlorobium phaeobacteroides BS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010831 |
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| Strand | - |
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| Start bp | 2696237 |
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| End bp | 2697673 |
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| Gene Length | 1437 bp |
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| Protein Length | 478 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 642685004 |
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| Product | UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate/D-alanyl-D-alanyl ligase |
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| Protein accession | YP_001960901 |
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| Protein GI | 189501431 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0770] UDP-N-acetylmuramyl pentapeptide synthase |
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| TIGRFAM ID | [TIGR01143] UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.865831 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAGCAAC ACGAAACGAT GAACGCTTGT CTGCAGAGAG AAGATTTTGA AAAAAACGGG
CAACTCTCGG GGTTTGCCCC GGATGATCCG GTGATTTTTC AGGAGCCCAC GGTGGTGATC
GATTCCCGGG AGATCACGGG AGGAGAGATA TTTGTCGCCC TGAAAGGTGA GCAGACGGAC
GGTCATCATT TTGTCCGGCA GGCGTTTGAG AAAGGAGCCG CCTGTGCTAT AGTAAGCCGG
GAGTGGTTCA GTCGCCAGGG CTCTTCAGCG CATGAAGCAG GGGCGCGTTA TCTGGTGACG
GCCGATACCA CAGAGGCCAT GCAGCGGCTT GCCGCTCTCT ACCGGTTGAA ATTTGCCATC
CCGGTGATCG GTATCGGTGG AAGCAACGGC AAGACGACGA CCAAGGAGAT GACTGCGTCG
GTTCTCAGGG CTCGTTACAG CGTGCACATG AGTGAGGGAA ATTTCAATAA CCATCTCGGG
GTTCCTCTGA CGCTTTTCGG TCTTCGTGAG AAACACGAAG TGGCTGTGGT GGAAATGGGC
ATCAACCATC CGGGTGAGAT GGAGCTGCTT GCAGAGATAG CTGCGCCGAC ACATGGGATG
TTGACCAATA TCGGTCATGA GCATCTTGAG TTTTTGCGGG ATCTGGACGG GGTGGCGAAT
GCCGAAACAG CCCTGTACCG GTATGTGCAG AAGAGTGGCG GAGTGGTGTT TGTCAACAGG
GAAGACAGCC GGCTTACTGA GGCAGCAGCC GGTATTCCCT CGACAGTCGG CTACGGCATT
GCGCTGGAGG GAGAGGGGTT CTGGGCTGAG GATATACGGA TGGACAACCT GGGCCGCGCG
CTGTTCACTC TCTGTTCATC TGCAGGAAAC GCACCGGTCA CGCTTGGTTT TGCGGGTCGT
CACAATGTCT CCAATGCCGT CGCCGCCGCT ACGGTCGGGT TTCATTTCGG ATTGACGCAG
GAGGAGATCG CCGGGGGGCT GGAGCGGCTG AAGCCTGAAG AGGGCTGGAA ACGCCTTGAA
TTTCAGCGAG CCGGGGGAAT AACCATTGTC AATGATACCT ATAATGCAAA CCCTGATTCG
GTCCGTAACG CGCTTGACCT GTTGTGCGAA CTGCCCGTTA CCGGGAAACG TGTTGCGGTG
ATCGGGGATA TGCTTGAGCT TGGCGGGGTG AGTTCTCCTG AACATGAGGA AATCGGCCGT
TACGCCGCAT CGCTCGACGG CCTGGATGCC TTCTACACTT TCGGGGAGCA GGCCGCTCTC
TGCTGCCGAA CGGCGGGAAT GAAATGTGCC GGGCATTTCA TGGACCACGG CGAGCTTCAG
CATCTGTTGC ACGAATCGCT CAGCCCCGGT GACGTACTGC TTCTTAAAGG CTCTCGCGGC
ATGAAGCTGG AACGAGTGGC AGAAGGCCTT ATGAACCTGT CAGGACCGGA TCAATAA
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| Protein sequence | MEQHETMNAC LQREDFEKNG QLSGFAPDDP VIFQEPTVVI DSREITGGEI FVALKGEQTD
GHHFVRQAFE KGAACAIVSR EWFSRQGSSA HEAGARYLVT ADTTEAMQRL AALYRLKFAI
PVIGIGGSNG KTTTKEMTAS VLRARYSVHM SEGNFNNHLG VPLTLFGLRE KHEVAVVEMG
INHPGEMELL AEIAAPTHGM LTNIGHEHLE FLRDLDGVAN AETALYRYVQ KSGGVVFVNR
EDSRLTEAAA GIPSTVGYGI ALEGEGFWAE DIRMDNLGRA LFTLCSSAGN APVTLGFAGR
HNVSNAVAAA TVGFHFGLTQ EEIAGGLERL KPEEGWKRLE FQRAGGITIV NDTYNANPDS
VRNALDLLCE LPVTGKRVAV IGDMLELGGV SSPEHEEIGR YAASLDGLDA FYTFGEQAAL
CCRTAGMKCA GHFMDHGELQ HLLHESLSPG DVLLLKGSRG MKLERVAEGL MNLSGPDQ
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