Gene Cphamn1_2383 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCphamn1_2383 
Symbol 
ID6376078 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium phaeobacteroides BS1 
KingdomBacteria 
Replicon accessionNC_010831 
Strand
Start bp2548271 
End bp2548897 
Gene Length627 bp 
Protein Length208 aa 
Translation table11 
GC content48% 
IMG OID642684864 
ProductNADH:ubiquinone oxidoreductase, subunit C 
Protein accessionYP_001960762 
Protein GI189501292 
COG category[C] Energy production and conversion 
COG ID[COG2869] Na+-transporting NADH:ubiquinone oxidoreductase, subunit NqrC 
TIGRFAM ID[TIGR01938] NADH:ubiquinone oxidoreductase, Na(+)-translocating, C subunit 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAAAGCA GTAACAGTTA TACATATTTT TTCGTCATAA CGATGGCCGT TATTTCCGCC 
CTGCTTCTCG CGATGTTGAA AATAAACCTG CAGGAGCGGC AGGAGTTCAA CAAGGCGCTC
GATACGAAAA AAAACGTATT GAAAACTGTC GGTCTGCTTG AGCCGGGTAT GAGCGGTAGT
GAAGTCGAAG AGCTCTTTAC GACGAAATTA GCCCGACAGG CAGTAACGGA CAGCGATGGA
AACGAGAGGG AGTATTATAT CTACGGCTCG CTTCAGAGCC CTGAAGGGTA TATTCTTCCG
GTGTCCGGAA AGGGGGTATG GTCTACCATC AATGGTTTTA TCGCGCTTGA ACCGGATAAA
AATACCGTTA AAGGCATATC GTTTTACGAT CACGGAGAAA CGCCGGGGCT TGGAGGAGAG
ATTGAAAAAG ATGCATTTGC AAACCGGTTC AGAGGAAAGA AAATCTTCAG GGACGGTGAG
CTGGTTTCCA TCACTATAGC AAAAGCCAGG CTCGAGGAAG AAAGTGAGCA TGCAGTTGAC
GGGATAAGCG GCGCATCACT GACTACGGGC GCGATCAACA CCTTTTTACG GAAAAACCTT
ACTGACTATC TCCAGCTGCT GAGATAA
 
Protein sequence
MQSSNSYTYF FVITMAVISA LLLAMLKINL QERQEFNKAL DTKKNVLKTV GLLEPGMSGS 
EVEELFTTKL ARQAVTDSDG NEREYYIYGS LQSPEGYILP VSGKGVWSTI NGFIALEPDK
NTVKGISFYD HGETPGLGGE IEKDAFANRF RGKKIFRDGE LVSITIAKAR LEEESEHAVD
GISGASLTTG AINTFLRKNL TDYLQLLR