Gene Cphamn1_2300 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCphamn1_2300 
Symbol 
ID6375995 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium phaeobacteroides BS1 
KingdomBacteria 
Replicon accessionNC_010831 
Strand
Start bp2470769 
End bp2471236 
Gene Length468 bp 
Protein Length155 aa 
Translation table11 
GC content53% 
IMG OID642684787 
Product30S ribosomal protein S7 
Protein accessionYP_001960685 
Protein GI189501215 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0049] Ribosomal protein S7 
TIGRFAM ID[TIGR01029] ribosomal protein S7, bacterial/organelle 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000109859 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000727759 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGGCCAAGA AAGTTGTAGG CGGCGGTGTC AAGCCTGATT TGCGTTTCAG TGACGAGAGT 
GTCGCCCGAT TGATCAATGC TGTTATGCTT GACGGAAAGA AGGATGTAGC GGCAAAAATA
GTGTACGGGG CAATGGACAT TATTGCCGGG AAGATGAAGG ATGAAGAGCC TCTCGAGGTA
TTTCGTCGTG CTCTGTCGAA TGTCGCTCCT CTGGTTGAGG TTCGCAGCAA GAGGGTTGGT
GGGGCTACCT ATCAGATTCC TATGGAGGTA AAGGCTTCCA GGCGGGATGC GCTGGCTTTT
CGCTGGATCA AGCTGTATGC TACGCGTCGC GGAGGGCGTT CCATGTCGGA AAAGCTTGCT
GCCGAGCTGA TGGATGCGGC GAGTGAGCAG GGCGCTTCTG TAAAGAAGAG GGATGAGGTA
CATCGTATGG CGGATGCGAA CAAGGCTTTT GCTCATTTCA GGTTTTAA
 
Protein sequence
MAKKVVGGGV KPDLRFSDES VARLINAVML DGKKDVAAKI VYGAMDIIAG KMKDEEPLEV 
FRRALSNVAP LVEVRSKRVG GATYQIPMEV KASRRDALAF RWIKLYATRR GGRSMSEKLA
AELMDAASEQ GASVKKRDEV HRMADANKAF AHFRF