Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cphamn1_2228 |
Symbol | |
ID | 6375922 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chlorobium phaeobacteroides BS1 |
Kingdom | Bacteria |
Replicon accession | NC_010831 |
Strand | - |
Start bp | 2413701 |
End bp | 2415044 |
Gene Length | 1344 bp |
Protein Length | 447 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 642684715 |
Product | (dimethylallyl)adenosine tRNA methylthiotransferase |
Protein accession | YP_001960614 |
Protein GI | 189501144 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0621] 2-methylthioadenine synthetase |
TIGRFAM ID | [TIGR00089] RNA modification enzyme, MiaB family [TIGR01574] tRNA-N(6)-(isopentenyl)adenosine-37 thiotransferase enzyme MiaB |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.696986 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAATAGTA TTATCAAAGG GAACGTACTT CAGATGACGA AAAAAGTGTA TATCCGAACC TTCGGCTGCC AGATGAATCA GGCCGATACG GAGATAATTA CAGCGTTGCT GCAGGATGAG GGGTATGTTA TGACGGGATC GGAAGAGCGT GCCGATCTGG TGATACTCAA CACCTGTGCC GTGAGGGAGA ATGCCGTTGA AAAGATTCTG CATACCCTGG ACCATATGAA AGGAAAACGA CGGTCGCGAC CGGGGCTGCT TGTTGGCGTG ATCGGTTGTG TTCCGCAGTA CTACAGGGAA AAGATGTTCG GGATGGCGGA CGGTATCGAT TTTCTCGCCG GCCCTGATAC CTACCGTCAG CTTCCCGCGA TGATAGCAAA TGCCGGGCAG GGGATTCGAG GAGCTGATTT CGGATTTTCT TCTGATGAAA CCTATTGCGG GATCGAACCG GCCCGTTCAG GCACGATCAG TGCGTTTATT CCCGTGATGC GGGGCTGCAA CAACAGGTGT GCGTTCTGCG TGGTGCCGTT TACCAGGGGA AAGGAACGGA GCCGTCCATT TCGCTCTGTA CTTGAAGACG TCGGGCGCCT TGCCGCGTCC GGCTACAAAG AGATTACTCT GCTCGGACAG AACGTTAATT CCTATAGTGA TGATGAGGCT GCGTGTGATT TTACTGAACT GCTTGACAGG GTGGCTGTTG CAGCAGAAGG AGTCCGTATC AGGTTTACTA CCTCCCACCC CAAGGATATT TCCGAATCAC TCGTGCGGGT GATTGCGGCC CGTAACAATA TCTGCAACGC TATTCACCTC CCCGTTCAGT CCGGCTCAAC CAGAATGCTC AAACTGATGA ACCGGGGGCA TACAAGGGAG GAGTACTTCG AGAAGATCGC CATGATACGC AGTGCTATTC CCGGGGTCAC GGTGTCGACA GATCTGATAG CGGGGTTCTG CGGTGAAACG CTGGAAGATC ATCAGGCCAC GCTGAGCATG ATGGAGGACG TACGATTTGA TTTTGCCTAT ATGTTTTACT ATTCGGTGCG ACCCGGTACC TATGCGGCGA AACATCTTCC TGACGATGTG CCCGAAGAGG AGAAAAAACG CCGTCTCGAA GAGATAATTG CTCTGCAGGG CAGCATTTCA GGGGAACGCA ATGCCGCTGA GGTTGGCGCT GTTGTGGAGG TGCTTGCCGA ATCGGAGAGC AAGCGGTCAA GCGAGATGCT GATGGGAAGA ACAGATACCA ACCGGGTTGT CGTGTTCGAC CGCCATGGGT TCGAGGCAGG CGATCTGGTG AAGGTGCGTA TCAGGTCGTC AACTCCGGCA ACGCTTATCG GCACACCTGC ATGA
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Protein sequence | MNSIIKGNVL QMTKKVYIRT FGCQMNQADT EIITALLQDE GYVMTGSEER ADLVILNTCA VRENAVEKIL HTLDHMKGKR RSRPGLLVGV IGCVPQYYRE KMFGMADGID FLAGPDTYRQ LPAMIANAGQ GIRGADFGFS SDETYCGIEP ARSGTISAFI PVMRGCNNRC AFCVVPFTRG KERSRPFRSV LEDVGRLAAS GYKEITLLGQ NVNSYSDDEA ACDFTELLDR VAVAAEGVRI RFTTSHPKDI SESLVRVIAA RNNICNAIHL PVQSGSTRML KLMNRGHTRE EYFEKIAMIR SAIPGVTVST DLIAGFCGET LEDHQATLSM MEDVRFDFAY MFYYSVRPGT YAAKHLPDDV PEEEKKRRLE EIIALQGSIS GERNAAEVGA VVEVLAESES KRSSEMLMGR TDTNRVVVFD RHGFEAGDLV KVRIRSSTPA TLIGTPA
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