Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cphamn1_2100 |
Symbol | |
ID | 6375794 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chlorobium phaeobacteroides BS1 |
Kingdom | Bacteria |
Replicon accession | NC_010831 |
Strand | - |
Start bp | 2271280 |
End bp | 2271942 |
Gene Length | 663 bp |
Protein Length | 220 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 642684591 |
Product | hypothetical protein |
Protein accession | YP_001960490 |
Protein GI | 189501020 |
COG category | [S] Function unknown |
COG ID | [COG5634] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.0318344 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.179652 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCGCTTA TTGATGGTTA CGGTGTTCTT GTCGGGACGA TTGACCGTTA TGCATGTGAT AACGGCCATA ACGACAAGGA ATACTATCAC TGTACTATTC GGGTGAAAAC CCGGGAGGGA TTCTATCGCT GCCCTGTCGA CCTTGACAGT AAAAAAGAGT ATGATGGCCT TCACTGGAGG GTTGTTGATC TTGGAAAGAG CGATATGCAT GGTCTTTCCG GACTTGAAAG CGGATGGCAC TTTCTCGAAT CGGAGCCTGG CTCCGGGGCT CTTGACTATC TGCGTAGCCC GGAACTGCAG CCGACCGGGA AGTGTGTCAG AGCCGGGTCA GGGTCTCATG AAAAAGGTGA CAAAGCCTGT TTATCCTGGA AATACGGGAC AAGCCGCGAT GCATTCGCCG ATCTTTCGGG CGTACTGGAC GGAGCGAAGA GGCTCCTGGT ATTCGGTGAG CCGTTTCGGG TGGGTAAGGG AGTGCATAAT ATCCATCAGA ATCAGGGAGA TCCATCTGAA AGCCGCTGGT CGAGGGAAAA CGGCATATGG CAGGACGGCG CGGTTGCGGG CATCAGGGAG GACGGTACGG TGAAAATGTT TCTCAACAGG TTCAAGACGC AGGCGACACA AACCGACGAG AGAGGGAAAC CGCTGAAAAA GAATGAGAAA TGA
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Protein sequence | MSLIDGYGVL VGTIDRYACD NGHNDKEYYH CTIRVKTREG FYRCPVDLDS KKEYDGLHWR VVDLGKSDMH GLSGLESGWH FLESEPGSGA LDYLRSPELQ PTGKCVRAGS GSHEKGDKAC LSWKYGTSRD AFADLSGVLD GAKRLLVFGE PFRVGKGVHN IHQNQGDPSE SRWSRENGIW QDGAVAGIRE DGTVKMFLNR FKTQATQTDE RGKPLKKNEK
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