Gene Cphamn1_2100 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCphamn1_2100 
Symbol 
ID6375794 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium phaeobacteroides BS1 
KingdomBacteria 
Replicon accessionNC_010831 
Strand
Start bp2271280 
End bp2271942 
Gene Length663 bp 
Protein Length220 aa 
Translation table11 
GC content52% 
IMG OID642684591 
Producthypothetical protein 
Protein accessionYP_001960490 
Protein GI189501020 
COG category[S] Function unknown 
COG ID[COG5634] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0318344 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.179652 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGCTTA TTGATGGTTA CGGTGTTCTT GTCGGGACGA TTGACCGTTA TGCATGTGAT 
AACGGCCATA ACGACAAGGA ATACTATCAC TGTACTATTC GGGTGAAAAC CCGGGAGGGA
TTCTATCGCT GCCCTGTCGA CCTTGACAGT AAAAAAGAGT ATGATGGCCT TCACTGGAGG
GTTGTTGATC TTGGAAAGAG CGATATGCAT GGTCTTTCCG GACTTGAAAG CGGATGGCAC
TTTCTCGAAT CGGAGCCTGG CTCCGGGGCT CTTGACTATC TGCGTAGCCC GGAACTGCAG
CCGACCGGGA AGTGTGTCAG AGCCGGGTCA GGGTCTCATG AAAAAGGTGA CAAAGCCTGT
TTATCCTGGA AATACGGGAC AAGCCGCGAT GCATTCGCCG ATCTTTCGGG CGTACTGGAC
GGAGCGAAGA GGCTCCTGGT ATTCGGTGAG CCGTTTCGGG TGGGTAAGGG AGTGCATAAT
ATCCATCAGA ATCAGGGAGA TCCATCTGAA AGCCGCTGGT CGAGGGAAAA CGGCATATGG
CAGGACGGCG CGGTTGCGGG CATCAGGGAG GACGGTACGG TGAAAATGTT TCTCAACAGG
TTCAAGACGC AGGCGACACA AACCGACGAG AGAGGGAAAC CGCTGAAAAA GAATGAGAAA
TGA
 
Protein sequence
MSLIDGYGVL VGTIDRYACD NGHNDKEYYH CTIRVKTREG FYRCPVDLDS KKEYDGLHWR 
VVDLGKSDMH GLSGLESGWH FLESEPGSGA LDYLRSPELQ PTGKCVRAGS GSHEKGDKAC
LSWKYGTSRD AFADLSGVLD GAKRLLVFGE PFRVGKGVHN IHQNQGDPSE SRWSRENGIW
QDGAVAGIRE DGTVKMFLNR FKTQATQTDE RGKPLKKNEK