Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cphamn1_2046 |
Symbol | |
ID | 6375739 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chlorobium phaeobacteroides BS1 |
Kingdom | Bacteria |
Replicon accession | NC_010831 |
Strand | - |
Start bp | 2209069 |
End bp | 2209422 |
Gene Length | 354 bp |
Protein Length | 117 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 642684537 |
Product | transcriptional regulator, fis family |
Protein accession | YP_001960437 |
Protein GI | 189500967 |
COG category | [R] General function prediction only |
COG ID | [COG2522] Predicted transcriptional regulator |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.03951 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.243031 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGGTATTTC CATGTGAAAG AGCCGTTTGG TACAATCTTC CCCAGATAAG GGCGGATATC GCCGTAGGGC TGGTTAAGTC AGGGATGACC CAGTCCCAGG CAGCAAAAAA GCTTGGTGTG ACTCCTGCGG CTGTCTCGCA GTATATGAAT AAAAAGAGAG GTCAGCAGGC GGTGAAAAGC AAGTCATATA AAGAGGAGAT AGCGGTAGCC GTTGAGAGAA TAGCTGAAGG AGCGAATGCC AGGGAGTTGC AATCTCTTGT CTGTAAATGC TGTCAGATTA TAACAGCTGA AACAACCGGG GAGAGCAGCC TTTGCGAGGA TAAAACGTCA AAGGAACAGG ATTCGGATGG GTAG
|
Protein sequence | MVFPCERAVW YNLPQIRADI AVGLVKSGMT QSQAAKKLGV TPAAVSQYMN KKRGQQAVKS KSYKEEIAVA VERIAEGANA RELQSLVCKC CQIITAETTG ESSLCEDKTS KEQDSDG
|
| |