Gene Cphamn1_2046 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCphamn1_2046 
Symbol 
ID6375739 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium phaeobacteroides BS1 
KingdomBacteria 
Replicon accessionNC_010831 
Strand
Start bp2209069 
End bp2209422 
Gene Length354 bp 
Protein Length117 aa 
Translation table11 
GC content49% 
IMG OID642684537 
Producttranscriptional regulator, fis family 
Protein accessionYP_001960437 
Protein GI189500967 
COG category[R] General function prediction only 
COG ID[COG2522] Predicted transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.03951 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.243031 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGTATTTC CATGTGAAAG AGCCGTTTGG TACAATCTTC CCCAGATAAG GGCGGATATC 
GCCGTAGGGC TGGTTAAGTC AGGGATGACC CAGTCCCAGG CAGCAAAAAA GCTTGGTGTG
ACTCCTGCGG CTGTCTCGCA GTATATGAAT AAAAAGAGAG GTCAGCAGGC GGTGAAAAGC
AAGTCATATA AAGAGGAGAT AGCGGTAGCC GTTGAGAGAA TAGCTGAAGG AGCGAATGCC
AGGGAGTTGC AATCTCTTGT CTGTAAATGC TGTCAGATTA TAACAGCTGA AACAACCGGG
GAGAGCAGCC TTTGCGAGGA TAAAACGTCA AAGGAACAGG ATTCGGATGG GTAG
 
Protein sequence
MVFPCERAVW YNLPQIRADI AVGLVKSGMT QSQAAKKLGV TPAAVSQYMN KKRGQQAVKS 
KSYKEEIAVA VERIAEGANA RELQSLVCKC CQIITAETTG ESSLCEDKTS KEQDSDG