| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphamn1_2018 |
|---|
| Symbol | |
|---|
| ID | 6375711 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chlorobium phaeobacteroides BS1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010831 |
|---|
| Strand | - |
|---|
| Start bp | 2171062 |
|---|
| End bp | 2171322 |
|---|
| Gene Length | 261 bp |
|---|
| Protein Length | 86 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 642684509 |
|---|
| Product | nitrogen-fixing NifU domain protein |
|---|
| Protein accession | YP_001960409 |
|---|
| Protein GI | 189500939 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0694] Thioredoxin-like proteins and domains |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.700022 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.591564 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAATACCA CCAAAGATTA TCTGCCAGAT ACCGATCCGC TGTATGACCG CGTTATCAAA
GCTCTTGAAG AGGTTCGACC CTATCTTCAG GCTGACGGCG GTGATTGCCA GCTTGTCGGC
ATCACCAAAG ATATGCTTGT CGATGTCAAG CTGCTTGGGG CTTGCGGATC ATGTCCGATG
AGCACACTGA CACTTCGTGC CGGTGTTGAA CAGGCGATCA AAAAAGCTGT TCCTGAAATA
GCGAGGGTCG AGGCGGTCTG A
|
|---|
| Protein sequence | MNTTKDYLPD TDPLYDRVIK ALEEVRPYLQ ADGGDCQLVG ITKDMLVDVK LLGACGSCPM
STLTLRAGVE QAIKKAVPEI ARVEAV
|
|---|
| |