Gene Cphamn1_1924 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCphamn1_1924 
Symbol 
ID6375616 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium phaeobacteroides BS1 
KingdomBacteria 
Replicon accessionNC_010831 
Strand
Start bp2088182 
End bp2089033 
Gene Length852 bp 
Protein Length283 aa 
Translation table11 
GC content31% 
IMG OID642684418 
Productglycosyl transferase family 11 
Protein accessionYP_001960319 
Protein GI189500849 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0942208 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACAAAG TGGTTGTTCA CTTGACTGGA GGTTTGGGCA ATCAAATGTT TCAGTATGCT 
CTTGGAAGGT CAATATCAAT TAATAGAAAT TGCCCATTAT TGTTAAATAC TTCATTTTAT
GATACTTATG ATAAGTTTTC TTGTGGCTTG TCAAGGTATA ATGTTAAGGC AGAGTTTATA
AAGAAGAATT CATATTATAA TAATAAGTAC TACAGATATG TAATAAGATT GCTTTCTCGT
TATGGGGTTG CTTGTTATTT TGGCTCATAT TATGAAAAGA AAATATTTAG TTATGATGAA
AAGGTGTATA AAAGAAGTTG TGTGAGTTAT TATGGCACAT GGCAGTCATA CGGGTATTTT
GATTCAATAA GAGATATTTT GTTGAGAGAT TATGAAATGG TTGGTTGTTT GGAAGAAGAG
GTCGAGAAGT ATGTGTCAGA TATAAAAAGA GTTGATTCGG TATCGTTGCA TATAAGAAGA
GGCGATTATT TTGATAATAA AAGATTGCAG AGTATTCATG GTATATTGAC AATGGAATAT
TATTATAAAG CAATGAGCCT TTTTCCCGAT AGTAGTGTCT TTTATGTTTT TTCTGATGAT
ATTGAATGGG TGAGAGAAAA TCTAATTACG AATACGAATA TTGTTTATGT GGTTCTCGAA
AGTGATAATC CTGAAAATGA AATATATCTT ATGTCTTTAT GTAAGAATAA TATAATATCT
AATAGTACTT TTAGTTGGTG GGGCGCATGG TTAAATAAAA ATAAATATAA AAAGGTGATT
GCTCCAAGAA TGTGGTATAA GGATAATCAG TCATCATCAG ATTTAATGCC GAGTGATTGG
TGTCTTATAT AG
 
Protein sequence
MDKVVVHLTG GLGNQMFQYA LGRSISINRN CPLLLNTSFY DTYDKFSCGL SRYNVKAEFI 
KKNSYYNNKY YRYVIRLLSR YGVACYFGSY YEKKIFSYDE KVYKRSCVSY YGTWQSYGYF
DSIRDILLRD YEMVGCLEEE VEKYVSDIKR VDSVSLHIRR GDYFDNKRLQ SIHGILTMEY
YYKAMSLFPD SSVFYVFSDD IEWVRENLIT NTNIVYVVLE SDNPENEIYL MSLCKNNIIS
NSTFSWWGAW LNKNKYKKVI APRMWYKDNQ SSSDLMPSDW CLI