| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphamn1_1804 |
|---|
| Symbol | |
|---|
| ID | 6375491 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chlorobium phaeobacteroides BS1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010831 |
|---|
| Strand | + |
|---|
| Start bp | 1952132 |
|---|
| End bp | 1952623 |
|---|
| Gene Length | 492 bp |
|---|
| Protein Length | 163 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 642684297 |
|---|
| Product | signal transduction histidine kinase, LytS |
|---|
| Protein accession | YP_001960203 |
|---|
| Protein GI | 189500733 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | [TIGR03426] rod shape-determining protein MreD |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGTAAAAA ATATTGTCAC CAACAGCGTT CTTCTCCTGA TACTCTGCAT TCTGCAGCAG
TACGCATTTT CCCGTCTGGT CATTTTCGGC GCGATGCCGG ATATTGTCAC CATATTCGTC
GCTTTCACTG CCTTGAGATA CGGACAGAAG CAGGGAACAA CCTTTGGCTT TGCTGCCGGG
ATTGTGACCG GAATTCTGAG CGGCAATATC GGCATCGAGA CATTATCAAA AACCATAGAG
GGTTTCATCG CGGGATACTT CCATATCCCG GAAGACAGTC ATGCCTCTGC TTTGCAGAAA
AAGCAGATGT TCTACAAGGG AGTCTTTCTT GCAAGCCTTA CAGGAAGAAT ACTCTCTACG
CTGACGCTCA ATGTACTCTC TTTACCGACG GCCTGGCATA TCGCCTACTC AATAGGCCTG
GCTACCCTGT TGACGATGAT TCTGGCCATA CTGTCCTATC AGCTTTTTTT AAAAAAAATT
CTTGCGAAAT AA
|
|---|
| Protein sequence | MVKNIVTNSV LLLILCILQQ YAFSRLVIFG AMPDIVTIFV AFTALRYGQK QGTTFGFAAG
IVTGILSGNI GIETLSKTIE GFIAGYFHIP EDSHASALQK KQMFYKGVFL ASLTGRILST
LTLNVLSLPT AWHIAYSIGL ATLLTMILAI LSYQLFLKKI LAK
|
|---|
| |