Gene Cphamn1_1735 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCphamn1_1735 
Symbol 
ID6375422 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium phaeobacteroides BS1 
KingdomBacteria 
Replicon accessionNC_010831 
Strand
Start bp1879557 
End bp1880312 
Gene Length756 bp 
Protein Length251 aa 
Translation table11 
GC content51% 
IMG OID642684228 
Productimidazole glycerol phosphate synthase subunit HisF 
Protein accessionYP_001960134 
Protein GI189500664 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0107] Imidazoleglycerol-phosphate synthase 
TIGRFAM ID[TIGR00735] imidazoleglycerol phosphate synthase, cyclase subunit 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTAGCAA AACGTATTAT TCCCTGTCTT GACGTCCGTG AAGGAAGAGT TGTCAAAGGC 
ATTAACTTTG AAGACTTGCG TGACGCAGGC TCCATTCTCG AACAGGCACG GTTCTATAAC
AATGAACTTG CCGACGAACT GGTTTTTCTC GACATATCAG CATCCCTTGA ATCGAGAAAG
ACAACACTCG AGGAAGTTTT AAAAGTTTCA GAAGAGGTGT TCATTCCTCT CACGGTAGGC
GGAGGCATCA GTTCGGTTGA ACGCGCAAGA GATGCATTCT TGCACGGCGC GGACAAAGTA
TCGGTCAACA CCGCCGCAGT CTACGACCCG AAACTGATCA CACGCATTGC CGACCAATAC
GGCTCACAGG CTGTTGTGGT CGCGATCGAC GTTAAAAAAG TCGGGGAAAA ATATATCGTT
CATACCCATT CCGGCAAAGA GCTGACAAAG TATGAAGCCC TTGAATGGGC CCGTATGGTT
CAGGAACTGG GCGCCGGAGA GATCCTGCTC ACCAGCATGG ACCGCGACGG CACAAAAGCA
GGTTACGATA ACGAGATACT CCGGGAAATT TCAACATCGG TGCACATCCC CGTTATCGCC
TCCGGCGGAG CAGGCAACCT CGAACACCTC TATGACGGAT TCGCCAAAGG ATGCGCCGAC
GCCGCGCTTG CCGCCTCCAT CTTCCACTTC CGCCAGTACA CCATCCGTGA AGCCAAAGAG
TATCTGCGGG AAAGAGGGAT AGAAGTCAGA CTGTAA
 
Protein sequence
MLAKRIIPCL DVREGRVVKG INFEDLRDAG SILEQARFYN NELADELVFL DISASLESRK 
TTLEEVLKVS EEVFIPLTVG GGISSVERAR DAFLHGADKV SVNTAAVYDP KLITRIADQY
GSQAVVVAID VKKVGEKYIV HTHSGKELTK YEALEWARMV QELGAGEILL TSMDRDGTKA
GYDNEILREI STSVHIPVIA SGGAGNLEHL YDGFAKGCAD AALAASIFHF RQYTIREAKE
YLRERGIEVR L