| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphamn1_1714 |
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| Symbol | |
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| ID | 6375401 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chlorobium phaeobacteroides BS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010831 |
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| Strand | - |
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| Start bp | 1855287 |
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| End bp | 1855949 |
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| Gene Length | 663 bp |
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| Protein Length | 220 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 642684207 |
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| Product | protein TolQ |
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| Protein accession | YP_001960113 |
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| Protein GI | 189500643 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0811] Biopolymer transport proteins |
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| TIGRFAM ID | [TIGR02796] TolQ protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.55654 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 3 |
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| Fosmid unclonability p-value | 0.00228712 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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| |
Sequence |
| Gene sequence | ATGGTTACAT CCAGAATCGG TTTTCTTTCT CTGATCGCCG ACGCAGGGCC GGTTGTGCTG
TTTGTTCTCG CTGTATTGCT GCTGTTTTCC GTGTTTTCCT GGACCATTAT TATGATGAAG
GCTCGCTTCA TAGGCAGAGC GATGTCTGAA TCAAGAGGTT TTCTTCACTA CTTTTTTGAT
GTCTCCAATG TTGACAAGGT TTTCGGAGAG ACAGAAAACT ACAGAAACGG TTCTCTTGCC
CGTGTTTTCA GAGCCGGCTA CCTGGAGTAT CGGGCTCTCG GTGAACTGAA GGACTCGGAG
AGGAGTGAGG AACGCATAGC GCGAGCGGTA AGACGGGAGG TTAATGAGGA GTCAAAAAGT
CTTTCCCGTT ACGTCCCTTT TCTCGCGACA GTCGGCAATA CCGCTCCGTT TATCGGTCTG
TTCGGTACCG TCTGGGGAAT TATGAATTCT TTTATGAGCA TAGGGGTTAC CCAGTCTGCG
TCACTTGCGA CTGTTGCTCC GGGGATTGCA GAAGCTTTGA TTGCAACTGC TGCAGGTCTT
GCCGCGGCAA TTCCGGCGGC TATCGCGTAC AATTACCTTA CCCAGCAGAT CAATCAGATT
GAGAGGGATC TGGATGATTT TTCCGGTGAA TTCATTAAAT CGTTTGTCAA TGAACTCGGC
TGA
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| Protein sequence | MVTSRIGFLS LIADAGPVVL FVLAVLLLFS VFSWTIIMMK ARFIGRAMSE SRGFLHYFFD
VSNVDKVFGE TENYRNGSLA RVFRAGYLEY RALGELKDSE RSEERIARAV RREVNEESKS
LSRYVPFLAT VGNTAPFIGL FGTVWGIMNS FMSIGVTQSA SLATVAPGIA EALIATAAGL
AAAIPAAIAY NYLTQQINQI ERDLDDFSGE FIKSFVNELG
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