| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphamn1_1551 |
|---|
| Symbol | |
|---|
| ID | 6375229 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chlorobium phaeobacteroides BS1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010831 |
|---|
| Strand | - |
|---|
| Start bp | 1673645 |
|---|
| End bp | 1674751 |
|---|
| Gene Length | 1107 bp |
|---|
| Protein Length | 368 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 642684042 |
|---|
| Product | phosphatidylserine decarboxylase-related |
|---|
| Protein accession | YP_001959956 |
|---|
| Protein GI | 189500486 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG0688] Phosphatidylserine decarboxylase |
|---|
| TIGRFAM ID | [TIGR00163] phosphatidylserine decarboxylase precursor |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.0183935 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 6 |
|---|
| Fosmid unclonability p-value | 0.0668406 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTTGAAA CTTCGATAGC AAAAGCCAAA AAAATCAATT CTGACCGAAA AACGAATCCG
GCACAGAGTC TGTCCGAATA CTATGATTAC ATAGACCGTG CATCTGAACT GCTTCCCCAG
CAGGTGCTCG AACGCCCTGC CGAATCCCTG CGTGATCAGA TGCTTCAGGG AATCTGTTAC
TTTTATTTTC TTGTCGGCCA ACCTCTGGAT GAACTTCAGG GAAAAGGACT CTACAAGAAT
TCCCTGCAGT ATTATCCTCC TTTTTCCAGC TGGTTGCGAA AGTATGCAGA TGCCTGGGGG
GAGTATCTCG ATACCGAAGC ATCGTGGAAT CAGGAAATTT ACCGGCAGAT TTACTATGCT
CCTGAATTCG GTTTACAGGA AGGCTGGTAT GAGAATCCTT CCAACTGGAA GACATTTAAC
GATTTTTTCT CAAAATATCT GCGATCACCT GACAAGCGTC CGGTTACAGC AGCAGATGAT
CCTTCAGTTG TGGTTTTCCC TGCGGATTCT GTTCCCCAGG GGACCTGGAC TATTGATGCA
AAATCGAATA TACATGTGGA GAACGGCTTG CAGGTAAAAC TTGCAAAGTA TTATAACGTA
GGGGATCTGC TGGGAGAAAA GAGCAAATAC CGGGATGCGT TTGCCAACGG TGTTCTGACA
CATTCGTTTC TTAATGTCAA TGATTATCAT CGTTATCATT TCGCTGTCGG CGGCAAGGTT
AAGGAAACGG CGATACTTTC GGAGAATGTC GCTCTCGAGG TTGCCTGGGA TCAAAAGGAA
GGGAAATATA TTCCCCTCGA CTCCACAGGC TGGCAGTTTA CCCAGACCCG CGGTTATGTG
ATTGTCGATA CCGGGAAATA CGGTCTGGTT GCACTCATAC CCATGGGGAT GGCGCATGTT
TCTTCGGTGA ATTTCGAAAA AAACGTGCAG GCTGGCAACA AATTTAAGAA AGGTGACATG
CTCGGGAATT TCCTGTTCGG CGGTTCAGAT TTCATCATGC TCTTCCAGGA AAAGGCGGGG
TTTGAAATGA CGGTGGAACT TGATAAGGCG AAGGCTTACA AGCACGGTCT TGTCGGTGAG
AAGTACGGGG TTATGAAAGG GGATTAG
|
|---|
| Protein sequence | MLETSIAKAK KINSDRKTNP AQSLSEYYDY IDRASELLPQ QVLERPAESL RDQMLQGICY
FYFLVGQPLD ELQGKGLYKN SLQYYPPFSS WLRKYADAWG EYLDTEASWN QEIYRQIYYA
PEFGLQEGWY ENPSNWKTFN DFFSKYLRSP DKRPVTAADD PSVVVFPADS VPQGTWTIDA
KSNIHVENGL QVKLAKYYNV GDLLGEKSKY RDAFANGVLT HSFLNVNDYH RYHFAVGGKV
KETAILSENV ALEVAWDQKE GKYIPLDSTG WQFTQTRGYV IVDTGKYGLV ALIPMGMAHV
SSVNFEKNVQ AGNKFKKGDM LGNFLFGGSD FIMLFQEKAG FEMTVELDKA KAYKHGLVGE
KYGVMKGD
|
|---|
| |